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package tap.db;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertTrue;
import static org.junit.Assert.fail;
import java.io.File;
import java.io.FileInputStream;
import java.io.IOException;
import java.io.InputStream;
import java.sql.Connection;
import java.sql.DatabaseMetaData;
import java.sql.ResultSet;
import java.sql.SQLException;
import java.sql.Statement;
import java.util.ArrayList;
import java.util.Iterator;
import org.junit.AfterClass;
import org.junit.BeforeClass;
import org.junit.Test;
import tap.data.DataReadException;
import tap.data.TableIterator;
import tap.data.VOTableIterator;
import tap.metadata.TAPColumn;
import tap.metadata.TAPForeignKey;
import tap.metadata.TAPMetadata;
import tap.metadata.TAPMetadata.STDSchema;
import tap.metadata.TAPMetadata.STDTable;
import tap.metadata.TAPSchema;
import tap.metadata.TAPTable;
import testtools.DBTools;
import adql.db.DBChecker;
import adql.db.DBColumn;
import adql.db.DBTable;
import adql.db.DBType;
import adql.db.DBType.DBDatatype;
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import adql.parser.ADQLParser;
import adql.parser.ParseException;
import adql.query.ADQLQuery;
import adql.query.IdentifierField;
import adql.translator.PostgreSQLTranslator;
public class JDBCConnectionTest {
private static Connection pgConnection;
private static JDBCConnection pgJDBCConnection;
private static JDBCConnection sensPgJDBCConnection;
private static Connection sqliteConnection;
private static JDBCConnection sqliteJDBCConnection;
private static JDBCConnection sensSqliteJDBCConnection;
private static String uploadExamplePath;
@BeforeClass
public static void setUpBeforeClass() throws Exception{
String projectDir = (new File("")).getAbsolutePath();
uploadExamplePath = projectDir + "/test/tap/db/upload_example.vot";
final String sqliteDbFile = projectDir + "/test/tap/db/TestTAPDb.db";
pgConnection = DBTools.createConnection("postgresql", "127.0.0.1", null, "gmantele", "gmantele", "pwd");
pgJDBCConnection = new JDBCConnection(pgConnection, new PostgreSQLTranslator(false), "POSTGRES", null);
sensPgJDBCConnection = new JDBCConnection(pgConnection, new PostgreSQLTranslator(true, true, true, true), "SensitivePSQL", null);
sqliteConnection = DBTools.createConnection("sqlite", null, null, sqliteDbFile, null, null);
sqliteJDBCConnection = new JDBCConnection(sqliteConnection, new PostgreSQLTranslator(false), "SQLITE", null);
sensSqliteJDBCConnection = new JDBCConnection(sqliteConnection, new PostgreSQLTranslator(true), "SensitiveSQLite", null);
}
@AfterClass
public static void tearDownAfterClass() throws Exception{
// There should be no difference between a POSTGRESQL connection and a SQLITE one!
JDBCConnection[] connections = new JDBCConnection[]{pgJDBCConnection,sensPgJDBCConnection,sqliteJDBCConnection,sensSqliteJDBCConnection};
for(JDBCConnection conn : connections){
dropSchema(STDSchema.TAPSCHEMA.label, conn);
dropSchema(STDSchema.UPLOADSCHEMA.label, conn);
}
pgConnection.close();
sqliteConnection.close();
}
/* ***** */
/* TESTS */
/* ***** */
@Test
public void testGetTAPSchemaTablesDef(){
// There should be no difference between a POSTGRESQL connection and a SQLITE one!
JDBCConnection[] connections = new JDBCConnection[]{pgJDBCConnection,sensPgJDBCConnection,sqliteJDBCConnection,sensSqliteJDBCConnection};
for(JDBCConnection conn : connections){
TAPMetadata meta = createCustomSchema();
TAPTable customColumns = meta.getTable(STDSchema.TAPSCHEMA.toString(), STDTable.COLUMNS.toString());
TAPTable[] tapTables = conn.mergeTAPSchemaDefs(meta);
TAPSchema stdSchema = TAPMetadata.getStdSchema();
assertEquals(5, tapTables.length);
assertTrue(equals(tapTables[0], stdSchema.getTable(STDTable.SCHEMAS.label)));
assertEquals(customColumns.getSchema(), tapTables[0].getSchema());
assertTrue(equals(tapTables[1], stdSchema.getTable(STDTable.TABLES.label)));
assertEquals(customColumns.getSchema(), tapTables[1].getSchema());
assertTrue(equals(tapTables[2], customColumns));
assertTrue(equals(tapTables[3], stdSchema.getTable(STDTable.KEYS.label)));
assertEquals(customColumns.getSchema(), tapTables[3].getSchema());
assertTrue(equals(tapTables[4], stdSchema.getTable(STDTable.KEY_COLUMNS.label)));
assertEquals(customColumns.getSchema(), tapTables[4].getSchema());
}
}
@Test
public void testSetTAPSchema(){
// There should be no difference between a POSTGRESQL connection and a SQLITE one!
JDBCConnection[] connections = new JDBCConnection[]{pgJDBCConnection,sensPgJDBCConnection,sqliteJDBCConnection,sensSqliteJDBCConnection};
for(JDBCConnection conn : connections){
short cnt = -1;
while(cnt < 1){
/* NO CUSTOM DEFINITION */
// Prepare the test:
if (cnt == -1)
dropSchema(STDSchema.TAPSCHEMA.label, conn);
else
createTAPSchema(conn);
// Do the test:
try{
TAPMetadata meta = new TAPMetadata();
int[] expectedCounts = getStats(meta);
conn.setTAPSchema(meta);
int[] effectiveCounts = getStats(conn, meta);
for(int i = 0; i < expectedCounts.length; i++)
assertEquals(expectedCounts[i], effectiveCounts[i]);
}catch(DBException dbe){
dbe.printStackTrace(System.err);
fail("[" + conn.getID() + ";no def] No error should happen here ; when an empty list of metadata is given, at least the TAP_SCHEMA should be created and filled with a description of itself.");
}
/* CUSTOM DEFINITION */
// Prepare the test:
if (cnt == -1)
dropSchema(STDSchema.TAPSCHEMA.label, conn);
// Do the test:
try{
TAPMetadata meta = createCustomSchema();
int[] expectedCounts = getStats(meta);
conn.setTAPSchema(meta);
int[] effectiveCounts = getStats(conn, meta);
for(int i = 0; i < expectedCounts.length; i++)
assertEquals(expectedCounts[i], effectiveCounts[i]);
}catch(DBException dbe){
dbe.printStackTrace(System.err);
fail("[" + conn.getID() + ";custom def] No error should happen here!");
}
cnt++;
}
}
}
@Test
public void testGetCreationOrder(){
// There should be no difference between a POSTGRESQL connection and a SQLITE one!
JDBCConnection[] connections = new JDBCConnection[]{pgJDBCConnection,sensPgJDBCConnection,sqliteJDBCConnection,sensSqliteJDBCConnection};
for(JDBCConnection conn : connections){
assertEquals(-1, conn.getCreationOrder(null));
assertEquals(0, conn.getCreationOrder(STDTable.SCHEMAS));
assertEquals(1, conn.getCreationOrder(STDTable.TABLES));
assertEquals(2, conn.getCreationOrder(STDTable.COLUMNS));
assertEquals(3, conn.getCreationOrder(STDTable.KEYS));
assertEquals(4, conn.getCreationOrder(STDTable.KEY_COLUMNS));
}
}
@Test
public void testGetDBMSDatatype(){
assertEquals("VARCHAR", pgJDBCConnection.getDBMSDatatype(null));
assertEquals("TEXT", sqliteJDBCConnection.getDBMSDatatype(null));
assertEquals("bytea", pgJDBCConnection.getDBMSDatatype(new DBType(DBDatatype.VARBINARY)));
assertEquals("BLOB", sqliteJDBCConnection.getDBMSDatatype(new DBType(DBDatatype.VARBINARY)));
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}
@Test
public void testMergeTAPSchemaDefs(){
// There should be no difference between a POSTGRESQL connection and a SQLITE one!
JDBCConnection[] connections = new JDBCConnection[]{pgJDBCConnection,sensPgJDBCConnection,sqliteJDBCConnection,sensSqliteJDBCConnection};
for(JDBCConnection conn : connections){
// TEST WITH NO METADATA OBJECT:
// -> expected: throws a NULL exception.
try{
conn.mergeTAPSchemaDefs(null);
}catch(Exception e){
assertEquals(NullPointerException.class, e.getClass());
}
// TEST WITH EMPTY METADATA OBJECT:
// -> expected: returns at least the 5 tables of the TAP_SCHEMA.
TAPTable[] stdTables = conn.mergeTAPSchemaDefs(new TAPMetadata());
assertEquals(5, stdTables.length);
for(TAPTable t : stdTables)
assertEquals(STDSchema.TAPSCHEMA.toString(), t.getADQLSchemaName());
assertEquals(STDTable.SCHEMAS.toString(), stdTables[0].getADQLName());
assertEquals(STDTable.TABLES.toString(), stdTables[1].getADQLName());
assertEquals(STDTable.COLUMNS.toString(), stdTables[2].getADQLName());
assertEquals(STDTable.KEYS.toString(), stdTables[3].getADQLName());
assertEquals(STDTable.KEY_COLUMNS.toString(), stdTables[4].getADQLName());
// TEST WITH INCOMPLETE TAP_SCHEMA TABLES LIST + 1 CUSTOM TAP_SCHEMA TABLE (here: TAP_SCHEMA.columns):
// -> expected: the 5 tables of the TAP_SCHEMA including the modification of the standard tables & ignore the additional table(s) if any (which is the case here).
TAPMetadata customMeta = createCustomSchema();
stdTables = conn.mergeTAPSchemaDefs(customMeta);
assertEquals(5, stdTables.length);
for(TAPTable t : stdTables)
assertEquals(STDSchema.TAPSCHEMA.toString(), t.getADQLSchemaName());
assertEquals(STDTable.SCHEMAS.toString(), stdTables[0].getADQLName());
assertEquals(STDTable.TABLES.toString(), stdTables[1].getADQLName());
assertEquals(STDTable.COLUMNS.toString(), stdTables[2].getADQLName());
assertEquals("Columns", stdTables[2].getDBName());
assertNotNull(stdTables[2].getColumn("TestNewColumn"));
assertEquals(STDTable.KEYS.toString(), stdTables[3].getADQLName());
assertEquals(STDTable.KEY_COLUMNS.toString(), stdTables[4].getADQLName());
}
}
@Test
public void testEquals(){
// There should be no difference between a POSTGRESQL connection and a SQLITE one!
JDBCConnection[] connections = new JDBCConnection[]{pgJDBCConnection,sensPgJDBCConnection,sqliteJDBCConnection,sensSqliteJDBCConnection};
for(JDBCConnection conn : connections){
// NULL tests:
assertFalse(conn.equals("tap_schema", null, false));
assertFalse(conn.equals("tap_schema", null, true));
assertFalse(conn.equals(null, "tap_schema", false));
assertFalse(conn.equals(null, "tap_schema", true));
assertFalse(conn.equals(null, null, false));
assertFalse(conn.equals(null, null, true));
// CASE SENSITIVE tests:
if (conn.supportsMixedCaseQuotedIdentifier || conn.mixedCaseQuoted){
assertFalse(conn.equals("tap_schema", "TAP_SCHEMA", true));
assertTrue(conn.equals("TAP_SCHEMA", "TAP_SCHEMA", true));
assertFalse(conn.equals("TAP_SCHEMA", "tap_schema", true));
assertFalse(conn.equals("Columns", "columns", true));
assertFalse(conn.equals("columns", "Columns", true));
}else if (conn.lowerCaseQuoted){
assertTrue(conn.equals("tap_schema", "TAP_SCHEMA", true));
assertFalse(conn.equals("TAP_SCHEMA", "TAP_SCHEMA", true));
assertFalse(conn.equals("TAP_SCHEMA", "tap_schema", true));
assertFalse(conn.equals("Columns", "columns", true));
assertTrue(conn.equals("columns", "Columns", true));
}else if (conn.upperCaseQuoted){
assertFalse(conn.equals("tap_schema", "TAP_SCHEMA", true));
assertTrue(conn.equals("TAP_SCHEMA", "TAP_SCHEMA", true));
assertTrue(conn.equals("TAP_SCHEMA", "tap_schema", true));
assertFalse(conn.equals("Columns", "columns", true));
assertFalse(conn.equals("columns", "Columns", true));
}else{
assertTrue(conn.equals("tap_schema", "TAP_SCHEMA", true));
assertTrue(conn.equals("TAP_SCHEMA", "TAP_SCHEMA", true));
assertTrue(conn.equals("TAP_SCHEMA", "tap_schema", true));
assertTrue(conn.equals("Columns", "columns", true));
assertTrue(conn.equals("columns", "Columns", true));
}
// CASE INSENSITIVE tests:
if (conn.supportsMixedCaseUnquotedIdentifier){
assertTrue(conn.equals("tap_schema", "TAP_SCHEMA", false));
assertTrue(conn.equals("TAP_SCHEMA", "TAP_SCHEMA", false));
assertTrue(conn.equals("TAP_SCHEMA", "tap_schema", false));
assertTrue(conn.equals("Columns", "columns", false));
assertTrue(conn.equals("columns", "Columns", false));
}else if (conn.lowerCaseUnquoted){
assertTrue(conn.equals("tap_schema", "TAP_SCHEMA", false));
assertFalse(conn.equals("TAP_SCHEMA", "TAP_SCHEMA", false));
assertFalse(conn.equals("TAP_SCHEMA", "tap_schema", false));
assertFalse(conn.equals("Columns", "columns", false));
assertTrue(conn.equals("columns", "Columns", false));
}else if (conn.upperCaseUnquoted){
assertFalse(conn.equals("tap_schema", "TAP_SCHEMA", false));
assertTrue(conn.equals("TAP_SCHEMA", "TAP_SCHEMA", false));
assertTrue(conn.equals("TAP_SCHEMA", "tap_schema", false));
assertFalse(conn.equals("Columns", "columns", false));
assertFalse(conn.equals("columns", "Columns", false));
}else{
assertTrue(conn.equals("tap_schema", "TAP_SCHEMA", false));
assertTrue(conn.equals("TAP_SCHEMA", "TAP_SCHEMA", false));
assertTrue(conn.equals("TAP_SCHEMA", "tap_schema", false));
assertTrue(conn.equals("Columns", "columns", false));
assertTrue(conn.equals("columns", "Columns", false));
}
}
}
@Test
public void testGetTAPSchema(){
// There should be no difference between a POSTGRESQL connection and a SQLITE one!
JDBCConnection[] connections = new JDBCConnection[]{pgJDBCConnection,sensPgJDBCConnection,sqliteJDBCConnection,sensSqliteJDBCConnection};
for(JDBCConnection conn : connections){
try{
// Prepare the test:
createTAPSchema(conn);
// Try to get it (which should work without any problem here):
conn.getTAPSchema();
}catch(DBException de){
de.printStackTrace(System.err);
fail("No pbm should happen here (either for the creation of a std TAP_SCHEMA or for its reading)! CAUSE: " + de.getMessage());
}
try{
// Prepare the test:
dropSchema(STDSchema.TAPSCHEMA.label, conn);
// Try to get it (which should work without any problem here):
conn.getTAPSchema();
fail("DBException expected, because none of the TAP_SCHEMA tables exist.");
}catch(DBException de){
assertTrue(de.getMessage().equals("Impossible to load schemas from TAP_SCHEMA.schemas!"));
}
}
}
@Test
public void testIsTableExisting(){
// There should be no difference between a POSTGRESQL connection and a SQLITE one!
JDBCConnection[] connections = new JDBCConnection[]{pgJDBCConnection,sensPgJDBCConnection,sqliteJDBCConnection,sensSqliteJDBCConnection};
for(JDBCConnection conn : connections){
try{
// Get the database metadata:
DatabaseMetaData dbMeta = conn.connection.getMetaData();
// Prepare the test:
createTAPSchema(conn);
// Test the existence of all TAP_SCHEMA tables:
assertTrue(conn.isTableExisting(STDSchema.TAPSCHEMA.label, STDTable.SCHEMAS.label, dbMeta));
assertTrue(conn.isTableExisting(STDSchema.TAPSCHEMA.label, STDTable.TABLES.label, dbMeta));
assertTrue(conn.isTableExisting(STDSchema.TAPSCHEMA.label, STDTable.COLUMNS.label, dbMeta));
assertTrue(conn.isTableExisting(STDSchema.TAPSCHEMA.label, STDTable.KEYS.label, dbMeta));
assertTrue(conn.isTableExisting(STDSchema.TAPSCHEMA.label, STDTable.KEY_COLUMNS.label, dbMeta));
// Test the non-existence of any other table:
assertFalse(conn.isTableExisting(null, "foo", dbMeta));
// Prepare the test:
dropSchema(STDSchema.TAPSCHEMA.label, conn);
// Test the non-existence of all TAP_SCHEMA tables:
assertFalse(conn.isTableExisting(STDSchema.TAPSCHEMA.label, STDTable.SCHEMAS.label, dbMeta));
assertFalse(conn.isTableExisting(STDSchema.TAPSCHEMA.label, STDTable.TABLES.label, dbMeta));
assertFalse(conn.isTableExisting(STDSchema.TAPSCHEMA.label, STDTable.COLUMNS.label, dbMeta));
assertFalse(conn.isTableExisting(STDSchema.TAPSCHEMA.label, STDTable.KEYS.label, dbMeta));
assertFalse(conn.isTableExisting(STDSchema.TAPSCHEMA.label, STDTable.KEY_COLUMNS.label, dbMeta));
}catch(Exception ex){
ex.printStackTrace(System.err);
fail("{" + conn.getID() + "} Testing the existence of a table should not throw an error!");
}
}
}
@Test
public void testAddUploadedTable(){
// There should be no difference between a POSTGRESQL connection and a SQLITE one!
JDBCConnection[] connections = new JDBCConnection[]{pgJDBCConnection,sensPgJDBCConnection,sqliteJDBCConnection,sensSqliteJDBCConnection};
TAPTable tableDef = null;
for(JDBCConnection conn : connections){
InputStream io = null;
try{
io = new FileInputStream(uploadExamplePath);
TableIterator it = new VOTableIterator(io);
TAPColumn[] cols = it.getMetadata();
tableDef = new TAPTable("UploadExample");
for(TAPColumn c : cols)
tableDef.addColumn(c);
// Prepare the test: no TAP_UPLOAD schema and no table TAP_UPLOAD.UploadExample:
dropSchema(STDSchema.UPLOADSCHEMA.label, conn);
// Test:
try{
assertTrue(conn.addUploadedTable(tableDef, it));
}catch(Exception ex){
ex.printStackTrace(System.err);
fail("{" + conn.ID + "} This error should not happen: no TAP_UPLOAD schema.");
}
close(io);
io = new FileInputStream(uploadExamplePath);
it = new VOTableIterator(io);
// Prepare the test: the TAP_UPLOAD schema exist but not the table TAP_UPLOAD.UploadExample:
dropTable(tableDef.getDBSchemaName(), tableDef.getDBName(), conn);
// Test:
try{
assertTrue(conn.addUploadedTable(tableDef, it));
}catch(Exception ex){
ex.printStackTrace(System.err);
fail("{" + conn.ID + "} This error should not happen: no TAP_UPLOAD schema.");
}
close(io);
io = new FileInputStream(uploadExamplePath);
it = new VOTableIterator(io);
// Prepare the test: the TAP_UPLOAD schema and the table TAP_UPLOAD.UploadExample BOTH exist:
;
// Test:
try{
assertFalse(conn.addUploadedTable(tableDef, it));
}catch(Exception ex){
if (ex instanceof DBException)
assertEquals("Impossible to create the user uploaded table in the database: " + conn.translator.getQualifiedTableName(tableDef) + "! This table already exists.", ex.getMessage());
else{
ex.printStackTrace(System.err);
fail("{" + conn.ID + "} DBException was the expected exception!");
}
}
}catch(Exception ex){
ex.printStackTrace(System.err);
fail("{" + conn.ID + "} This error should never happen except there is a problem with the file (" + uploadExamplePath + ").");
}finally{
close(io);
}
}
}
@Test
public void testDropUploadedTable(){
TAPTable tableDef = new TAPTable("TableToDrop");
TAPSchema uploadSchema = new TAPSchema(STDSchema.UPLOADSCHEMA.label);
uploadSchema.addTable(tableDef);
// There should be no difference between a POSTGRESQL connection and a SQLITE one!
JDBCConnection[] connections = new JDBCConnection[]{pgJDBCConnection,sensPgJDBCConnection,sqliteJDBCConnection,sensSqliteJDBCConnection};
for(JDBCConnection conn : connections){
try{
// 1st TEST CASE: the schema TAP_UPLOAD does not exist -> no error should be raised!
// drop the TAP_UPLOAD schema:
dropSchema(uploadSchema.getDBName(), conn);
// try to drop the table:
assertTrue(conn.dropUploadedTable(tableDef));
// 2nd TEST CASE: the table does not exists -> no error should be raised!
// create the TAP_UPLOAD schema, but not the table:
createSchema(uploadSchema.getDBName(), conn);
// try to drop the table:
assertTrue(conn.dropUploadedTable(tableDef));
// 3rd TEST CASE: the table and the schema exist -> the table should be created without any error!
// create the fake uploaded table:
createFooTable(tableDef.getDBSchemaName(), tableDef.getDBName(), conn);
// try to drop the table:
assertTrue(conn.dropUploadedTable(tableDef));
}catch(Exception ex){
ex.printStackTrace(System.err);
fail("{" + conn.ID + "} This error should not happen. The table should be dropped and even if it does not exist, no error should be thrown.");
}
}
}
@Test
public void testExecuteQuery(){
TAPSchema schema = TAPMetadata.getStdSchema();
ArrayList<DBTable> tables = new ArrayList<DBTable>(schema.getNbTables());
for(TAPTable t : schema)
tables.add(t);
ADQLParser parser = new ADQLParser(new DBChecker(tables));
parser.setDebug(false);
// There should be no difference between a POSTGRESQL connection and a SQLITE one!
JDBCConnection[] connections = new JDBCConnection[]{pgJDBCConnection,sensPgJDBCConnection,sqliteJDBCConnection,sensSqliteJDBCConnection};
for(JDBCConnection conn : connections){
if (conn.ID.equalsIgnoreCase("SQLITE")){
for(DBTable t : tables){
TAPTable tapT = (TAPTable)t;
tapT.getSchema().setDBName(null);
tapT.setDBName(tapT.getSchema().getADQLName() + "_" + tapT.getDBName());
}
}
TableIterator result = null;
try{
// Prepare the test: create the TAP_SCHEMA:
dropSchema(STDSchema.TAPSCHEMA.label, conn);
// Build the ADQLQuery object:
ADQLQuery query = parser.parseQuery("SELECT table_name FROM TAP_SCHEMA.tables;");
// Execute the query:
result = conn.executeQuery(query);
fail("{" + conn.ID + "} This test should have failed because TAP_SCHEMA was supposed to not exist!");
}catch(DBException de){
assertTrue(de.getMessage().startsWith("Unexpected error while executing a SQL query: "));
assertTrue(de.getMessage().indexOf("tap_schema") > 0 || de.getMessage().indexOf("TAP_SCHEMA") > 0);
}catch(ParseException pe){
pe.printStackTrace(System.err);
fail("There should be no pbm to parse the ADQL expression!");
}finally{
if (result != null){
try{
result.close();
}catch(DataReadException de){}
result = null;
}
}
try{
// Prepare the test: create the TAP_SCHEMA:
createTAPSchema(conn);
// Build the ADQLQuery object:
ADQLQuery query = parser.parseQuery("SELECT table_name FROM TAP_SCHEMA.tables;");
// Execute the query:
result = conn.executeQuery(query);
assertEquals(1, result.getMetadata().length);
int cntRow = 0;
while(result.nextRow()){
cntRow++;
assertTrue(result.hasNextCol());
assertNotNull(TAPMetadata.resolveStdTable((String)result.nextCol()));
assertFalse(result.hasNextCol());
}
assertEquals(5, cntRow);
}catch(DBException de){
de.printStackTrace(System.err);
fail("No ADQL/SQL query error was expected here!");
}catch(ParseException pe){
fail("There should be no pbm to parse the ADQL expression!");
}catch(DataReadException e){
e.printStackTrace(System.err);
fail("There should be no pbm when accessing rows and the first (and only) columns of the result!");
}catch(Exception ex){
ex.printStackTrace(System.err);
fail("There should be no pbm when reading the query result!");
}finally{
if (result != null){
try{
result.close();
}catch(DataReadException de){}
result = null;
}
}
}
}
/* ************** */
/* TOOL FUNCTIONS */
/* ************** */
public final static void main(final String[] args) throws Throwable{
JDBCConnection conn = new JDBCConnection(DBTools.createConnection("postgresql", "127.0.0.1", null, "gmantele", "gmantele", "pwd"), new PostgreSQLTranslator(), "TEST_POSTGRES", null);
JDBCConnectionTest.createTAPSchema(conn);
JDBCConnectionTest.dropSchema(STDSchema.TAPSCHEMA.label, conn);
}
private static void dropSchema(final String schemaName, final JDBCConnection conn){
Statement stmt = null;
ResultSet rs = null;
try{
stmt = conn.connection.createStatement();
final boolean caseSensitive = conn.translator.isCaseSensitive(IdentifierField.SCHEMA);
if (conn.supportsSchema)
stmt.executeUpdate("DROP SCHEMA IF EXISTS " + formatIdentifier(schemaName, caseSensitive) + " CASCADE;");
else{
startTransaction(conn);
final String tablePrefix = conn.getTablePrefix(schemaName);
final int prefixLen = tablePrefix.length();
if (prefixLen <= 0)
return;
rs = conn.connection.getMetaData().getTables(null, null, null, null);
ArrayList<String> tablesToDrop = new ArrayList<String>();
while(rs.next()){
String table = rs.getString(3);
if (table.length() > prefixLen){
if (equals(schemaName, table.substring(0, prefixLen - 1), caseSensitive))
tablesToDrop.add(table);
}
}
close(rs);
rs = null;
for(String t : tablesToDrop)
stmt.executeUpdate("DROP TABLE IF EXISTS \"" + t + "\";");
commit(conn);
}
}catch(Exception ex){
rollback(conn);
ex.printStackTrace(System.err);
fail("{" + conn.ID + "} Impossible to prepare a test by: dropping the schema " + schemaName + "!");
}finally{
close(rs);
close(stmt);
}
}
private static void dropTable(final String schemaName, final String tableName, final JDBCConnection conn){
Statement stmt = null;
ResultSet rs = null;
try{
final boolean sCaseSensitive = conn.translator.isCaseSensitive(IdentifierField.SCHEMA);
final boolean tCaseSensitive = conn.translator.isCaseSensitive(IdentifierField.TABLE);
stmt = conn.connection.createStatement();
if (conn.supportsSchema)
stmt.executeUpdate("DROP TABLE IF EXISTS " + formatIdentifier(schemaName, sCaseSensitive) + "." + formatIdentifier(tableName, tCaseSensitive) + ";");
else{
final String tablePrefix = conn.getTablePrefix(schemaName);
final int prefixLen = tablePrefix.length();
rs = conn.connection.getMetaData().getTables(null, null, null, null);
String tableToDrop = null;
while(rs.next()){
String table = rs.getString(3);
if (prefixLen <= 0 && equals(tableName, table, tCaseSensitive)){
tableToDrop = table;
break;
}else if (prefixLen > 0 && table.length() > prefixLen){
if (equals(schemaName, table.substring(0, prefixLen - 1), sCaseSensitive) && equals(tableName, table.substring(prefixLen + 1), tCaseSensitive)){
tableToDrop = table;
break;
}
}
}
close(rs);
if (tableToDrop != null)
stmt.executeUpdate("DROP TABLE IF EXISTS \"" + tableToDrop + "\";");
}
}catch(Exception ex){
ex.printStackTrace(System.err);
fail("{" + conn.ID + "} Impossible to prepare a test by: dropping the table " + schemaName + "." + tableName + "!");
}finally{
close(rs);
close(stmt);
}
}
private static void createSchema(final String schemaName, final JDBCConnection conn){
if (!conn.supportsSchema)
return;
dropSchema(schemaName, conn);
Statement stmt = null;
ResultSet rs = null;
try{
final boolean sCaseSensitive = conn.translator.isCaseSensitive(IdentifierField.SCHEMA);
stmt = conn.connection.createStatement();
stmt.executeUpdate("CREATE SCHEMA " + formatIdentifier(schemaName, sCaseSensitive) + ";");
}catch(Exception ex){
ex.printStackTrace(System.err);
fail("{" + conn.ID + "} Impossible to prepare a test by: creating the schema " + schemaName + "!");
}finally{
close(rs);
close(stmt);
}
}
private static void createFooTable(final String schemaName, final String tableName, final JDBCConnection conn){
dropTable(schemaName, tableName, conn);
Statement stmt = null;
ResultSet rs = null;
try{
final boolean sCaseSensitive = conn.translator.isCaseSensitive(IdentifierField.SCHEMA);
final boolean tCaseSensitive = conn.translator.isCaseSensitive(IdentifierField.TABLE);
String tablePrefix = formatIdentifier(schemaName, sCaseSensitive);
if (tablePrefix == null)
tablePrefix = "";
else
tablePrefix += (conn.supportsSchema ? "." : "_");
stmt = conn.connection.createStatement();
stmt.executeUpdate("CREATE TABLE " + tablePrefix + formatIdentifier(tableName, tCaseSensitive) + " (ID integer);");
}catch(Exception ex){
ex.printStackTrace(System.err);
fail("{" + conn.ID + "} Impossible to prepare a test by: creating the table " + schemaName + "." + tableName + "!");
}finally{
close(rs);
close(stmt);
}
}
private static void createTAPSchema(final JDBCConnection conn){
dropSchema(STDSchema.TAPSCHEMA.label, conn);
Statement stmt = null;
try{
final boolean sCaseSensitive = conn.translator.isCaseSensitive(IdentifierField.SCHEMA);
final boolean tCaseSensitive = conn.translator.isCaseSensitive(IdentifierField.TABLE);
String[] tableNames = new String[]{STDTable.SCHEMAS.label,STDTable.TABLES.label,STDTable.COLUMNS.label,STDTable.KEYS.label,STDTable.KEY_COLUMNS.label};
if (conn.supportsSchema){
for(int i = 0; i < tableNames.length; i++)
tableNames[i] = formatIdentifier(STDSchema.TAPSCHEMA.label, sCaseSensitive) + "." + formatIdentifier(tableNames[i], tCaseSensitive);
}else{
for(int i = 0; i < tableNames.length; i++)
tableNames[i] = formatIdentifier(conn.getTablePrefix(STDSchema.TAPSCHEMA.label) + tableNames[i], tCaseSensitive);
}
startTransaction(conn);
stmt = conn.connection.createStatement();
if (conn.supportsSchema)
stmt.executeUpdate("CREATE SCHEMA " + formatIdentifier(STDSchema.TAPSCHEMA.label, sCaseSensitive) + ";");
stmt.executeUpdate("CREATE TABLE " + tableNames[0] + "(\"schema_name\" VARCHAR,\"description\" VARCHAR,\"utype\" VARCHAR, PRIMARY KEY(\"schema_name\"));");
stmt.executeUpdate("DELETE FROM " + tableNames[0] + ";");
stmt.executeUpdate("CREATE TABLE " + tableNames[1] + "(\"schema_name\" VARCHAR,\"table_name\" VARCHAR,\"table_type\" VARCHAR,\"description\" VARCHAR,\"utype\" VARCHAR, PRIMARY KEY(\"schema_name\", \"table_name\"));");
stmt.executeUpdate("DELETE FROM " + tableNames[1] + ";");
stmt.executeUpdate("CREATE TABLE " + tableNames[2] + "(\"table_name\" VARCHAR,\"column_name\" VARCHAR,\"description\" VARCHAR,\"unit\" VARCHAR,\"ucd\" VARCHAR,\"utype\" VARCHAR,\"datatype\" VARCHAR,\"size\" INTEGER,\"principal\" INTEGER,\"indexed\" INTEGER,\"std\" INTEGER, PRIMARY KEY(\"table_name\", \"column_name\"));");
stmt.executeUpdate("DELETE FROM " + tableNames[2] + ";");
stmt.executeUpdate("CREATE TABLE " + tableNames[3] + "(\"key_id\" VARCHAR,\"from_table\" VARCHAR,\"target_table\" VARCHAR,\"description\" VARCHAR,\"utype\" VARCHAR, PRIMARY KEY(\"key_id\"));");
stmt.executeUpdate("DELETE FROM " + tableNames[3] + ";");
stmt.executeUpdate("CREATE TABLE " + tableNames[4] + "(\"key_id\" VARCHAR,\"from_column\" VARCHAR,\"target_column\" VARCHAR, PRIMARY KEY(\"key_id\"));");
stmt.executeUpdate("DELETE FROM " + tableNames[4] + ";");
TAPMetadata metadata = new TAPMetadata();
metadata.addSchema(TAPMetadata.getStdSchema());
ArrayList<TAPTable> lstTables = new ArrayList<TAPTable>();
for(TAPSchema schema : metadata){
stmt.executeUpdate("INSERT INTO " + tableNames[0] + " VALUES('" + schema.getADQLName() + "','" + schema.getDescription() + "','" + schema.getUtype() + "')");
for(TAPTable t : schema)
lstTables.add(t);
}
ArrayList<DBColumn> lstCols = new ArrayList<DBColumn>();
for(TAPTable table : lstTables){
stmt.executeUpdate("INSERT INTO " + tableNames[1] + " VALUES('" + table.getADQLSchemaName() + "','" + table.getADQLName() + "','" + table.getType() + "','" + table.getDescription() + "','" + table.getUtype() + "')");
for(DBColumn c : table)
lstCols.add(c);
}
lstTables = null;
for(DBColumn c : lstCols){
TAPColumn col = (TAPColumn)c;
stmt.executeUpdate("INSERT INTO " + tableNames[2] + " VALUES('" + col.getTable().getADQLName() + "','" + col.getADQLName() + "','" + col.getDescription() + "','" + col.getUnit() + "','" + col.getUcd() + "','" + col.getUtype() + "','" + col.getDatatype().type + "'," + col.getDatatype().length + "," + (col.isPrincipal() ? 1 : 0) + "," + (col.isIndexed() ? 1 : 0) + "," + (col.isStd() ? 1 : 0) + ")");
}
commit(conn);
}catch(Exception ex){
rollback(conn);
ex.printStackTrace(System.err);
fail("{" + conn.ID + "} Impossible to prepare a test by: creating TAP_SCHEMA!");
}finally{
close(stmt);
}
}
private static void startTransaction(final JDBCConnection conn){
try{
conn.connection.setAutoCommit(false);
}catch(SQLException se){}
}
private static void commit(final JDBCConnection conn){
try{
conn.connection.commit();
conn.connection.setAutoCommit(true);
}catch(SQLException se){}
}
private static void rollback(final JDBCConnection conn){
try{
conn.connection.rollback();
conn.connection.setAutoCommit(true);
}catch(SQLException se){}
}
private static String formatIdentifier(final String identifier, final boolean caseSensitive){
if (identifier == null)
return null;
else if (identifier.charAt(0) == '"')
return identifier;
else if (caseSensitive)
return "\"" + identifier + "\"";
else
return identifier;
}
private static boolean equals(final String name1, final String name2, final boolean caseSensitive){
return (name1 != null && name2 != null && (caseSensitive ? name1.equals(name2) : name1.equalsIgnoreCase(name2)));
}
private static boolean equals(final TAPTable table1, final TAPTable table2){
if (table1 == null || table2 == null){
//System.out.println("[EQUALS] tables null!");
return false;
}
if (!table1.getFullName().equals(table2.getFullName())){
//System.out.println("[EQUALS] tables name different: " + table1.getFullName() + " != " + table2.getFullName() + "!");
return false;
}
if (table1.getType() != table2.getType()){
//System.out.println("[EQUALS] tables type different: " + table1.getType() + " != " + table2.getType() + "!");
return false;
}
if (table1.getNbColumns() != table2.getNbColumns()){
//System.out.println("[EQUALS] tables length different: " + table1.getNbColumns() + " columns != " + table2.getNbColumns() + " columns!");
return false;
}
Iterator<TAPColumn> it = table1.getColumns();
while(it.hasNext()){
TAPColumn col1 = it.next();
if (!equals(col1, table2.getColumn(col1.getADQLName()))){
//System.out.println("[EQUALS] tables columns different!");
return false;
}
}
return true;
}
private static boolean equals(final TAPColumn col1, final TAPColumn col2){
if (col1 == null || col2 == null){
//System.out.println("[EQUALS] columns null!");
return false;
}
if (!col1.getADQLName().equals(col2.getADQLName())){
//System.out.println("[EQUALS] columns name different: " + col1.getADQLName() + " != " + col2.getADQLName() + "!");
return false;
}
if (!equals(col1.getDatatype(), col2.getDatatype())){
//System.out.println("[EQUALS] columns type different: " + col1.getDatatype() + " != " + col2.getDatatype() + "!");
return false;
}
if (col1.getUnit() != col2.getUnit()){
//System.out.println("[EQUALS] columns unit different: " + col1.getUnit() + " != " + col2.getUnit() + "!");
return false;
}
if (col1.getUcd() != col2.getUcd()){
//System.out.println("[EQUALS] columns ucd different: " + col1.getUcd() + " != " + col2.getUcd() + "!");
return false;
}
return true;
}
private static boolean equals(final DBType type1, final DBType type2){
return type1 != null && type2 != null && type1.type == type2.type && type1.length == type2.length;
}
private static TAPMetadata createCustomSchema(){
TAPMetadata tapMeta = new TAPMetadata();
TAPSchema tapSchema = new TAPSchema(STDSchema.TAPSCHEMA.toString());
TAPTable customColumns = (TAPTable)TAPMetadata.getStdTable(STDTable.COLUMNS).copy("Columns", STDTable.COLUMNS.label);
customColumns.addColumn("TestNewColumn", new DBType(DBDatatype.VARCHAR), "This is a fake column, just for test purpose.", null, null, null);
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tapSchema.addTable(customColumns);
TAPTable addTable = new TAPTable("AdditionalTable");
addTable.addColumn("Blabla");
addTable.addColumn("Foo");
tapSchema.addTable(addTable);
tapMeta.addSchema(tapSchema);
return tapMeta;
}
/**
* <p>Get the expected counts after a call of {@link JDBCConnection#setTAPSchema(TAPMetadata)}.</p>
*
* <p>Counts are computed from the given metadata ; the same metadata that will be given to {@link JDBCConnection#setTAPSchema(TAPMetadata)}.</p>
*
* @param meta
*
* @return An integer array with the following values: [0]=nbSchemas, [1]=nbTables, [2]=nbColumns, [3]=nbKeys and [4]=nbKeyColumns.
*/
private static int[] getStats(final TAPMetadata meta){
int[] counts = new int[]{1,5,0,0,0};
int[] stdColCounts = new int[]{3,5,11,5,3};
for(int c = 0; c < stdColCounts.length; c++)
counts[2] += stdColCounts[c];
Iterator<TAPSchema> itSchemas = meta.iterator();
while(itSchemas.hasNext()){
TAPSchema schema = itSchemas.next();
boolean isTapSchema = (schema.getADQLName().equalsIgnoreCase(STDSchema.TAPSCHEMA.toString()));
if (!isTapSchema)
counts[0]++;
Iterator<TAPTable> itTables = schema.iterator();
while(itTables.hasNext()){
TAPTable table = itTables.next();
if (isTapSchema && TAPMetadata.resolveStdTable(table.getADQLName()) != null){
int ind = pgJDBCConnection.getCreationOrder(TAPMetadata.resolveStdTable(table.getADQLName()));
counts[2] -= stdColCounts[ind];
}else
counts[1]++;
Iterator<DBColumn> itColumns = table.iterator();
while(itColumns.hasNext()){
itColumns.next();
counts[2]++;
}
Iterator<TAPForeignKey> itKeys = table.getForeignKeys();
while(itKeys.hasNext()){
TAPForeignKey fk = itKeys.next();
counts[3]++;
counts[4] += fk.getNbRelations();
}
}
}
return counts;
}
/**
* <p>Get the effective counts after a call of {@link JDBCConnection#setTAPSchema(TAPMetadata)}.</p>
*
* <p>Counts are computed directly from the DB using the given connection; the same connection used to set the TAP schema in {@link JDBCConnection#setTAPSchema(TAPMetadata)}.</p>
*
* @param conn
* @param meta Metadata, in order to get the standard TAP tables' name.
*
* @return An integer array with the following values: [0]=nbSchemas, [1]=nbTables, [2]=nbColumns, [3]=nbKeys and [4]=nbKeyColumns.
*/
private static int[] getStats(final JDBCConnection conn, final TAPMetadata meta){
int[] counts = new int[5];
Statement stmt = null;
try{
stmt = conn.connection.createStatement();
TAPSchema tapSchema = meta.getSchema(STDSchema.TAPSCHEMA.toString());
String schemaPrefix = formatIdentifier(tapSchema.getDBName(), conn.translator.isCaseSensitive(IdentifierField.SCHEMA));
if (schemaPrefix == null)
schemaPrefix = "";
else
schemaPrefix += (conn.supportsSchema ? "." : "_");
boolean tCaseSensitive = conn.translator.isCaseSensitive(IdentifierField.TABLE);
TAPTable tapTable = tapSchema.getTable(STDTable.SCHEMAS.toString());
counts[0] = count(stmt, schemaPrefix + formatIdentifier(tapTable.getDBName(), tCaseSensitive), tapSchema.getADQLName() + "." + tapTable.getADQLName());
tapTable = tapSchema.getTable(STDTable.TABLES.toString());
counts[1] = count(stmt, schemaPrefix + formatIdentifier(tapTable.getDBName(), tCaseSensitive), tapSchema.getADQLName() + "." + tapTable.getADQLName());
tapTable = tapSchema.getTable(STDTable.COLUMNS.toString());
counts[2] = count(stmt, schemaPrefix + formatIdentifier(tapTable.getDBName(), tCaseSensitive), tapSchema.getADQLName() + "." + tapTable.getADQLName());
tapTable = tapSchema.getTable(STDTable.KEYS.toString());
counts[3] = count(stmt, schemaPrefix + formatIdentifier(tapTable.getDBName(), tCaseSensitive), tapSchema.getADQLName() + "." + tapTable.getADQLName());
tapTable = tapSchema.getTable(STDTable.KEY_COLUMNS.toString());
counts[4] = count(stmt, schemaPrefix + formatIdentifier(tapTable.getDBName(), tCaseSensitive), tapSchema.getADQLName() + "." + tapTable.getADQLName());
}catch(SQLException se){
fail("Can not create a statement!");
}finally{
try{
if (stmt != null)
stmt.close();
}catch(SQLException ex){}
}
return counts;
}
private static int count(final Statement stmt, final String qualifiedTableName, final String adqlTableName){
ResultSet rs = null;
try{
rs = stmt.executeQuery("SELECT COUNT(*) FROM " + qualifiedTableName + ";");
rs.next();
return rs.getInt(1);
}catch(Exception e){
e.printStackTrace(System.err);
fail("Can not count! Maybe " + qualifiedTableName + " (in ADQL: " + adqlTableName + ") does not exist.");
return -1;
}finally{
close(rs);
}
}
private static void close(final ResultSet rs){
if (rs == null)
return;
try{
rs.close();
}catch(SQLException se){}
}