updated example

%% Cell type:markdown id: tags:

## MoonDB Jupyter notebook workbook

#### Alessandro Frigeri, IAPS/INAF, Rome Italy

%% Cell type:code id: tags:

``` python

# First we import the moondb module

%load_ext autoreload

%autoreload 2

%aimport moondb

print(moondb.__file__)

```

%% Output

    The autoreload extension is already loaded. To reload it, use:

      %reload_ext autoreload

    /home/alf/gitwrk/pymoondb/moondb/__init__.py

%% Cell type:code id: tags:

``` python

# Let's get a list of the missions in MoonDB

mlist = moondb.get_missions()

[m.name for m in mlist]

```

%% Output

    ['Apollo 11',

     'Apollo 12',

     'Apollo 14',

     'Apollo 15',

     'Apollo 16',

     'Apollo 17',

     'Luna 16',

     'Luna 20',

     'Luna 24']

%% Cell type:code id: tags:

``` python

# Now, we want to know how many specimens are available from the Apollo 17 missions

f = moondb.SpecimenFilter()

mission = 'Apollo 17'

f.missionName = [ mission ]

results = f.get_results()

specimen_list = [r for r in results]

print("MoonDB holds {} specimens from  Apollo 17.".format(len(specimen_list)))

```

%% Output

    MoonDB holds 2991 specimens from  Apollo 17.

%% Cell type:code id: tags:

``` python

# Get a list of type of specimen of Apollo 17 available in MoonDB

s_list = [s.specimenType for s in specimen_list]

list(sorted(set(s_list)))

```

%% Output

    ['COMPOSITE',

     'ROCK',

     'ROCK/Basalt/Ilmenite Basalt',

     'ROCK/Basalt/Unclassified Basalt',

     'ROCK/Breccia/Fragmental Breccia',

     'ROCK/Breccia/Impact Melt Breccia',

     'ROCK/Breccia/Regolith Breccia',

     'ROCK/Breccia/Unclassified Breccia',

     'ROCK/Crustal/Crustal:Cataclasite',

     'ROCK/Crustal/Crustal:Norite',

     'ROCK/Crustal/Crustal:Troctolite',

     'SOIL/Soil:1-2mm',

     'SOIL/Soil:2-4mm',

     'SOIL/Soil:4-10mm',

     'SOIL/Soil:<1mm',

     'SOIL/Soil:Unsieved',

     'Unknown']

%% Cell type:code id: tags:

``` python

```

%% Cell type:code id: tags:

``` python

```

%% Cell type:code id: tags:

``` python

#

# Let's see the analyses done on the first specimen

#

s_list = [s for s in specimen_list]

print(len(s_list))

s0 = s_list[0]

an_list = [a for a in s0.get_analyses()]

```

%% Output

    2991

%% Cell type:code id: tags:

``` python

# now we check the results of the first analysis

#result_of

print(an_list[0].dataResultsObj)

```

%% Output

    [result of MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY (code MC-ICP-MS), result of MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY (code MC-ICP-MS), result of MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY (code MC-ICP-MS), result of MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY (code MC-ICP-MS), result of MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY (code MC-ICP-MS), result of MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY (code MC-ICP-MS), result of MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY (code MC-ICP-MS), result of MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY (code MC-ICP-MS), result of CACULATED (code CALC)]

%% Cell type:code id: tags:

``` python

print(mission+" specimen: ",s0.specimenName)

for r in an_list[0].dataResultsObj:

   print('Result: {} {} {} ({})'.format(r.variable,r.value,r.unit,r.methodName))

```

%% Output

    Apollo 17 specimen:  76535,16

    Result: Os 8.5 ppb (MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY)

    Result: Ir 55.0 ppb (MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY)

    Result: Ru 81.0 ppb (MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY)

    Result: Pt 54.0 ppb (MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY)

    Result: Pd 89.0 ppb (MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY)

    Result: Re 9.0 ppb (MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY)

    Result: Re187_Os188 5.1 Not Applicable (MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY)

    Result: Os187_Os188 0.1511 Not Applicable (MULTICOLLECTOR INDUCTIVELY COUPLED PLASMA MASS SPECTROMETRY)

    Result: G_Os(T) -348.0 Not Applicable (CACULATED)

%% Cell type:code id: tags:

``` python

```

%% Cell type:code id: tags:

``` python

```

%% Cell type:code id: tags:

``` python

```

   if ln:

      for n in ln:

         count,spec = _get_resp('/specimenlist/mission/'+n) 

         count,spec = _get_resp('/specimenlist/landmark/'+n) 

         sp_list.extend(spec)

   if sty:

      for st in sty:

         count,spec = _get_resp('/specimenlist/mission/'+st) 

         count,spec = _get_resp('/specimenlist/specimentype/'+st) 

         sp_list.extend(spec)

   if ste:

      for st in ste:

         count,spec = _get_resp('/specimenlist/mission/'+st) 

         count,spec = _get_resp('/specimenlist/samplingtechnique/'+st) 

         sp_list.extend(spec)

   sp_obj_list = []