Updates GitLab CI, removing postgres container service and psql usage.

image: code.usgs.gov:5001/astrogeology/autocnet/mambaforge

services:

    - name: code.usgs.gov:5001/astrogeology/autocnet/postgis

      alias: postgres

      entrypoint: ["docker-entrypoint.sh"]

      command: ["postgres"]

variables:

    POSTGRES_HOST: postgres

    POSTGRES_USER: postgres

    POSTGRES_PASSWORD: NotTheDefault

    POSTGRES_HOST_AUTH_METHOD: trust

before_script:

  - mamba env create -f environment.yml -n autocnet_env

  - conda init

    - wget "https://asc-isisdata.s3.us-west-2.amazonaws.com/autocnet_test_data/B08_012650_1780_XN_02S046W.l1.cal.destriped.crop.cub" -P tests/test_subpixel_match/

    - wget "https://asc-isisdata.s3.us-west-2.amazonaws.com/autocnet_test_data/D16_033458_1785_XN_01S046W.l1.cal.destriped.crop.cub" -P tests/test_subpixel_match/

    - wget "https://asc-isisdata.s3.us-west-2.amazonaws.com/autocnet_test_data/J04_046447_1777_XI_02S046W.l1.cal.destriped.crop.cub" -P tests/test_subpixel_match/

    - psql -h $POSTGRES_HOST -c 'create database template_postgis;' -U postgres ;

    - psql template_postgis -h $POSTGRES_HOST -U postgres -c 'create extension postgis';

    - psql template_postgis -U $POSTGRES_USER -h $POSTGRES_HOST -c 'create extension postgis_topology';

    - psql -d template_postgis -U $POSTGRES_USER -h $POSTGRES_HOST -c 'GRANT ALL ON geometry_columns TO PUBLIC;';

    - psql -d template_postgis -U $POSTGRES_USER -h $POSTGRES_HOST -c 'GRANT ALL ON geography_columns TO PUBLIC;';

    - psql -d template_postgis -U $POSTGRES_USER -h $POSTGRES_HOST -c 'GRANT ALL ON spatial_ref_sys TO PUBLIC;';

    - pytest .

pages:

coveralls

fakeredis

mock-alchemy

pytest

pytest-cov

pytest-mock

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