Loading autocnet/graph/tests/test_cluster_submit.py +4 −4 Original line number Diff line number Diff line Loading @@ -40,12 +40,12 @@ def complex_message(): 'kwargs' : {"k1" : "foo", "k2" : "bar"}, 'func':'autocnet.place_points'}, cls=JsonEncoder) def test_manage_simple_messages(args, queue, simple_message, mocker, capfd, ncg): def test_manage_simple_messages(args, queue, simple_message, mocker, capfd, session): queue.rpush(args['processing_queue'], simple_message) response_msg = {'success':True, 'results':'Things were good.', 'kwargs' : {'Session' : ncg.Session}} 'kwargs' : {'Session' : session}} mocker.patch('autocnet.graph.cluster_submit.process', return_value=response_msg) mocker.patch.dict(os.environ, {"SLURM_JOB_ID": "1000"}) Loading @@ -54,10 +54,10 @@ def test_manage_simple_messages(args, queue, simple_message, mocker, capfd, ncg) # Check that the messages are finalizing assert queue.llen(args['working_queue']) == 0 def test_manage_complex_messages(args, queue, complex_message, mocker, capfd, ncg): def test_manage_complex_messages(args, queue, complex_message, mocker, capfd, session): queue.rpush(args['processing_queue'], complex_message) response_msg = {'success':True, 'results':'Things were good.', 'kwargs' : {'Session' : ncg.Session}} response_msg = {'success':True, 'results':'Things were good.', 'kwargs' : {'Session' : session}} mocker.patch('autocnet.graph.cluster_submit.process', return_value=response_msg) mocker.patch.dict(os.environ, {"SLURM_JOB_ID": "1000"}) Loading autocnet/io/db/model.py +2 −8 Original line number Diff line number Diff line Loading @@ -5,17 +5,13 @@ import os import sqlalchemy from sqlalchemy.ext.declarative import declarative_base from sqlalchemy import (Column, String, Integer, Float, \ ForeignKey, Boolean, LargeBinary, \ UniqueConstraint, event, DateTime ) from sqlalchemy import Column, String, Integer, Float, ForeignKey, Boolean, event, DateTime from sqlalchemy.dialects.postgresql import ARRAY, JSONB from sqlalchemy.orm import relationship, backref from sqlalchemy_utils import database_exists, create_database from sqlalchemy.types import TypeDecorator from sqlalchemy.ext.hybrid import hybrid_property from sqlalchemy.orm.attributes import QueryableAttribute from sqlalchemy import text from sqlalchemy.sql import func from geoalchemy2 import Geometry Loading Loading @@ -44,7 +40,6 @@ class BaseMixin(object): default.extend(['id', 'modified_at', 'created_at']) if not _path: _path = self.__tablename__.lower() Loading Loading @@ -158,8 +153,7 @@ class BaseMixin(object): return obj @staticmethod def bulkadd(iterable, Session): session = Session() def bulkadd(iterable, session): session.add_all(iterable) session.commit() session.close() Loading autocnet/io/db/tests/test_images.py +1 −1 Original line number Diff line number Diff line Loading @@ -33,5 +33,5 @@ def test_get_images_intersecting_point(session): session.filter(Images) point = Point(1,0) res = Images.get_images_intersecting_point(point, session) Images.get_images_intersecting_point(point, session) session.filter.assert_called_once() autocnet/io/db/tests/test_overlay.py +3 −20 Original line number Diff line number Diff line import pytest import sqlalchemy from shapely import Polygon, Point from shapely import Polygon from autocnet.io.db.model import Overlay def test_overlay_exists(tables): assert Overlay.__tablename__ in tables def test_latitudinal_srid(session): """ Tests that the object is properly setting the latitudinal SRID from the configuration file. """ o1={'id':1, 'intersections':[1,2,3], 'geom':Polygon([(0,0), (-1,0), (-1,-1), (0,-1), (0,0)])} a = Overlay.create(session, **o1) assert a.latitudinal_srid == 4326 session.commit() res = session.query(Overlay).first() assert res.id == 1 assert res.latitudinal_srid == 4326 @pytest.mark.parametrize('data', [ {'id':1}, Loading @@ -42,5 +25,5 @@ def test_overlapping_larger_than(session): session.commit() larger = Overlay.overlapping_larger_than(0.5, session) assert len(larger) == 1 assert larger[0].id == 1 session.filter.assert_called_once() autocnet/io/db/tests/test_points.py +7 −1 Original line number Diff line number Diff line Loading @@ -80,3 +80,9 @@ def test_add_measures_to_point(session): assert point.measures[1].sample == 0.5 assert point.measures[2].serial == 'serial' assert point.measures[3].imageid == 0 def test_bulk_add(session): point = Points() points = [point] * 10 Points.bulkadd(points, session) assert len(session.query(Points).all()) == 10 No newline at end of file Loading
autocnet/graph/tests/test_cluster_submit.py +4 −4 Original line number Diff line number Diff line Loading @@ -40,12 +40,12 @@ def complex_message(): 'kwargs' : {"k1" : "foo", "k2" : "bar"}, 'func':'autocnet.place_points'}, cls=JsonEncoder) def test_manage_simple_messages(args, queue, simple_message, mocker, capfd, ncg): def test_manage_simple_messages(args, queue, simple_message, mocker, capfd, session): queue.rpush(args['processing_queue'], simple_message) response_msg = {'success':True, 'results':'Things were good.', 'kwargs' : {'Session' : ncg.Session}} 'kwargs' : {'Session' : session}} mocker.patch('autocnet.graph.cluster_submit.process', return_value=response_msg) mocker.patch.dict(os.environ, {"SLURM_JOB_ID": "1000"}) Loading @@ -54,10 +54,10 @@ def test_manage_simple_messages(args, queue, simple_message, mocker, capfd, ncg) # Check that the messages are finalizing assert queue.llen(args['working_queue']) == 0 def test_manage_complex_messages(args, queue, complex_message, mocker, capfd, ncg): def test_manage_complex_messages(args, queue, complex_message, mocker, capfd, session): queue.rpush(args['processing_queue'], complex_message) response_msg = {'success':True, 'results':'Things were good.', 'kwargs' : {'Session' : ncg.Session}} response_msg = {'success':True, 'results':'Things were good.', 'kwargs' : {'Session' : session}} mocker.patch('autocnet.graph.cluster_submit.process', return_value=response_msg) mocker.patch.dict(os.environ, {"SLURM_JOB_ID": "1000"}) Loading
autocnet/io/db/model.py +2 −8 Original line number Diff line number Diff line Loading @@ -5,17 +5,13 @@ import os import sqlalchemy from sqlalchemy.ext.declarative import declarative_base from sqlalchemy import (Column, String, Integer, Float, \ ForeignKey, Boolean, LargeBinary, \ UniqueConstraint, event, DateTime ) from sqlalchemy import Column, String, Integer, Float, ForeignKey, Boolean, event, DateTime from sqlalchemy.dialects.postgresql import ARRAY, JSONB from sqlalchemy.orm import relationship, backref from sqlalchemy_utils import database_exists, create_database from sqlalchemy.types import TypeDecorator from sqlalchemy.ext.hybrid import hybrid_property from sqlalchemy.orm.attributes import QueryableAttribute from sqlalchemy import text from sqlalchemy.sql import func from geoalchemy2 import Geometry Loading Loading @@ -44,7 +40,6 @@ class BaseMixin(object): default.extend(['id', 'modified_at', 'created_at']) if not _path: _path = self.__tablename__.lower() Loading Loading @@ -158,8 +153,7 @@ class BaseMixin(object): return obj @staticmethod def bulkadd(iterable, Session): session = Session() def bulkadd(iterable, session): session.add_all(iterable) session.commit() session.close() Loading
autocnet/io/db/tests/test_images.py +1 −1 Original line number Diff line number Diff line Loading @@ -33,5 +33,5 @@ def test_get_images_intersecting_point(session): session.filter(Images) point = Point(1,0) res = Images.get_images_intersecting_point(point, session) Images.get_images_intersecting_point(point, session) session.filter.assert_called_once()
autocnet/io/db/tests/test_overlay.py +3 −20 Original line number Diff line number Diff line import pytest import sqlalchemy from shapely import Polygon, Point from shapely import Polygon from autocnet.io.db.model import Overlay def test_overlay_exists(tables): assert Overlay.__tablename__ in tables def test_latitudinal_srid(session): """ Tests that the object is properly setting the latitudinal SRID from the configuration file. """ o1={'id':1, 'intersections':[1,2,3], 'geom':Polygon([(0,0), (-1,0), (-1,-1), (0,-1), (0,0)])} a = Overlay.create(session, **o1) assert a.latitudinal_srid == 4326 session.commit() res = session.query(Overlay).first() assert res.id == 1 assert res.latitudinal_srid == 4326 @pytest.mark.parametrize('data', [ {'id':1}, Loading @@ -42,5 +25,5 @@ def test_overlapping_larger_than(session): session.commit() larger = Overlay.overlapping_larger_than(0.5, session) assert len(larger) == 1 assert larger[0].id == 1 session.filter.assert_called_once()
autocnet/io/db/tests/test_points.py +7 −1 Original line number Diff line number Diff line Loading @@ -80,3 +80,9 @@ def test_add_measures_to_point(session): assert point.measures[1].sample == 0.5 assert point.measures[2].serial == 'serial' assert point.measures[3].imageid == 0 def test_bulk_add(session): point = Points() points = [point] * 10 Points.bulkadd(points, session) assert len(session.query(Points).all()) == 10 No newline at end of file