Loading .gitattributes 0 → 100644 +221 −0 Original line number Diff line number Diff line # This global .gitattributes file is adhered to via command: # git config --global core.attributesfile ~/git-global/.gitattributes_global # # Use this file on every device where git development is done. ### ### Auto detect text files and perform LF normalization ### # http://davidlaing.com/2012/09/19/customise-your-gitattributes-to-become-a-git-ninja/ * text=auto ### ### The above will handle all files NOT found below. ### From https://github.com/alexkaratarakis/gitattributes ### ### gitattributes/C++.gitattributes d3b93d4 on Jun 20, 2018 #sources *.c text diff=cpp *.cc text diff=cpp *.cxx text diff=cpp *.cpp text diff=cpp *.c++ text diff=cpp *.hpp text diff=cpp *.h text diff=cpp *.h++ text diff=cpp *.hh text diff=cpp # Compiled Object files *.slo binary *.lo binary *.o binary *.obj binary # Precompiled Headers *.gch binary *.pch binary # Compiled Dynamic libraries *.so binary *.dylib binary *.dll binary # Compiled Static libraries *.lai binary *.la binary *.a binary *.lib binary # Executables *.exe binary *.out binary *.app binary # Other ############## *.exe binary *.num binary *.xls binary *.xlsx binary *.XLS binary *.XLSX binary bin/ binary ### gitattributes/Common.gitattributes 9b38185 on Jun 9, 2018 # Common settings that generally should always be used with your language specific settings # Auto detect text files and perform LF normalization # http://davidlaing.com/2012/09/19/customise-your-gitattributes-to-become-a-git-ninja/ * text=auto # # The above will handle all files NOT found below # # Documents *.doc diff=astextplain *.DOC diff=astextplain *.docx diff=astextplain *.DOCX diff=astextplain *.dot diff=astextplain *.DOT diff=astextplain *.pdf diff=astextplain *.PDF diff=astextplain *.rtf diff=astextplain *.RTF diff=astextplain *.md text diff=markdown *.adoc text *.textile text *.tex text diff=tex *.mustache text *.csv text *.tab text *.tsv text *.sql text # Graphics *.png binary *.jpg binary *.jpeg binary *.gif binary *.tif binary *.tiff binary *.ico binary # SVG treated as an asset (binary) by default. If you want to treat it as text, # comment-out the following line and uncomment the line after. *.svg binary #*.svg text *.eps binary ### gitattributes/Java.gitattributes c08b42f on Mar 29, 2017 # Handle line endings automatically for files detected as text # and leave all files detected as binary untouched. * text=auto # # The above will handle all files NOT found below # # These files are text and should be normalized (Convert crlf => lf) *.css text *.df text *.htm text *.html text *.java text *.js text *.json text *.jsp text *.jspf text *.jspx text *.properties text *.sh text *.tld text *.txt text *.tag text *.tagx text *.xml text *.yml text *.toml text # These files are binary and should be left untouched # (binary is a macro for -text -diff) *.class binary *.dll binary *.ear binary *.gif binary *.ico binary *.jar binary *.jpg binary *.jpeg binary *.png binary *.so binary *.war binary ### gitattributes/Matlab.gitattributes d2539f6 on Dec 3, 2015 # Basic .gitattributes for a MATLAB repo. # This template includes Simulink and MuPAD extensions, in addition # to the MATLAB extensions. # Source files # ============ *.m text *.mu text # Caution: *.m also matches Mathematica packages. # Binary files # ============ *.p binary *.mex* binary *.fig binary *.mat binary *.mdl binary *.slx binary *.mdlp binary *.slxp binary *.sldd binary *.mltbx binary *.mlappinstall binary *.mlpkginstall binary *.mn binary ### gitattributes/Python.gitattributes cbd3af4 on Jun 20, 2018 # Basic .gitattributes for a python repo. # Source files # ============ *.pxd text diff=python *.py text diff=python *.py3 text diff=python *.pyw text diff=python *.pyx text diff=python # Binary files # ============ *.db binary *.p binary *.pkl binary *.pyc binary *.pyd binary *.pyo binary # Note: .db, .p, and .pkl files are associated # with the python modules ``pickle``, ``dbm.*``, # ``shelve``, ``marshal``, ``anydbm``, & ``bsddb`` # (among others). ### gitattributes/R.gitattributes 80aacc1 on Aug 22, 2015 # Basic .gitattributes for a R repo. # Source files # ============ *.Rdata text *.rdb binary *.rds binary *.Rd text *.Rdx binary *.Rmd text *.R text .github/workflows/CI.yml 0 → 100644 +37 −0 Original line number Diff line number Diff line name: CI on: push: branches: - main tags: '*' pull_request: concurrency: # Skip intermediate builds: always. # Cancel intermediate builds: only if it is a pull request build. group: ${{ github.workflow }}-${{ github.ref }} cancel-in-progress: ${{ startsWith(github.ref, 'refs/pull/') }} jobs: test: name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }} runs-on: ${{ matrix.os }} strategy: fail-fast: false matrix: version: - '1' os: - ubuntu-latest arch: - x64 steps: - uses: actions/checkout@v4 - uses: julia-actions/setup-julia@v1 with: version: ${{ matrix.version }} arch: ${{ matrix.arch }} - uses: julia-actions/cache@v1 - uses: julia-actions/julia-buildpkg@v1 - name: Run tests run: > julia --project=. --color=yes test/runtests.jl .gitignore 0 → 100644 +416 −0 Original line number Diff line number Diff line ################################################################################ # DrWatson Project Structure # ################################################################################ # Folders to ignore - files may be too large, too many, etc. NOTE: EDIT IF NEEDED. /data /videos /plots /notebooks /_research ################################################################################ # Julia # ################################################################################ # Files generated by invoking Julia with --code-coverage *.jl.cov *.jl.*.cov # Files generated by invoking Julia with --track-allocation *.jl.mem # System-specific files and directories generated by the BinaryProvider and # BinDeps packages. # They contain absolute paths, and so should not be committed deps/deps.jl deps/build.log deps/downloads/ deps/usr/ deps/src/ # Build artifacts for creating documentation generated by the Documenter package docs/build/ docs/site/ ################################################################################ # Jupyter Notebook # ################################################################################ .ipynb_checkpoints */.ipynb_checkpoints/* ################################################################################ # Microsoft Office # ################################################################################ *.tmp # Word temporary ~$*.doc* # Word Auto Backup File Backup of *.doc* # Excel temporary ~$*.xls* # Excel Backup File *.xlk # PowerPoint temporary ~$*.ppt* ################################################################################ # LaTeX # ################################################################################ ## Core latex/pdflatex auxiliary files: *.aux *.lof *.log *.lot *.fls *.out *.toc *.fmt *.fot *.cb *.cb2 .*.lb ## Intermediate documents: *.dvi *.xdv *-converted-to.* # these rules will exclude image files for figures, et cetera... # *.ps # *.eps # *.pdf ## Generated if empty string given at "Please type another file name for output:" .pdf ## Bibliography auxiliary files (bibtex/biblatex/biber): *.bbl *.bcf *.blg *-blx.aux *-blx.bib *.run.xml ## Build tool auxiliary files: *.fdb_latexmk *.synctex *.synctex(busy) *.synctex.gz *.synctex.gz(busy) *.pdfsync ## Build tool directories for auxiliary files # latexrun latex.out/ ## Auxiliary and intermediate files from other packages: # algorithms *.alg *.loa # achemso acs-*.bib # amsthm *.thm # beamer *.nav *.pre *.snm *.vrb # changes *.soc # comment *.cut # cprotect *.cpt # elsarticle (documentclass of Elsevier journals) *.spl # endnotes *.ent # fixme *.lox # feynmf/feynmp *.mf *.mp *.t[1-9] *.t[1-9][0-9] *.tfm #(r)(e)ledmac/(r)(e)ledpar *.end *.?end *.[1-9] *.[1-9][0-9] *.[1-9][0-9][0-9] *.[1-9]R *.[1-9][0-9]R *.[1-9][0-9][0-9]R *.eledsec[1-9] *.eledsec[1-9]R *.eledsec[1-9][0-9] *.eledsec[1-9][0-9]R *.eledsec[1-9][0-9][0-9] *.eledsec[1-9][0-9][0-9]R # glossaries *.acn *.acr *.glg *.glo *.gls *.glsdefs # gnuplottex *-gnuplottex-* # gregoriotex *.gaux *.gtex # htlatex *.4ct *.4tc *.idv *.lg *.trc *.xref # hyperref *.brf # knitr *-concordance.tex # listings *.lol # luatexja-ruby *.ltjruby # makeidx *.idx *.ilg *.ind *.ist # minitoc *.maf *.mlf *.mlt *.mtc[0-9]* *.slf[0-9]* *.slt[0-9]* *.stc[0-9]* # minted _minted* *.pyg # morewrites *.mw # nomencl *.nlg *.nlo *.nls # pax *.pax # pdfpcnotes *.pdfpc # sagetex *.sagetex.sage *.sagetex.py *.sagetex.scmd # scrwfile *.wrt # sympy *.sout *.sympy sympy-plots-for-*.tex/ # pdfcomment *.upa *.upb # pythontex *.pytxcode pythontex-files-*/ # tcolorbox *.listing # thmtools *.loe # TikZ & PGF *.dpth *.md5 *.auxlock # todonotes *.tdo # vhistory *.hst *.ver # easy-todo *.lod # xcolor *.xcp # xmpincl *.xmpi # xindy *.xdy # xypic precompiled matrices *.xyc # endfloat *.ttt *.fff # Latexian TSWLatexianTemp* ## Editors: # WinEdt *.bak *.sav # Texpad .texpadtmp # LyX *.lyx~ # Kile *.backup # KBibTeX *~[0-9]* # auto folder when using emacs and auctex ./auto/* *.el # expex forward references with \gathertags *-tags.tex # standalone packages *.sta ### LaTeX Patch ### # glossaries *.glstex ################################################################################ # Operating systems # ################################################################################ ######################################## # Linux # ######################################## *~ # temporary files which can be created if a process still has a handle open of # a deleted file .fuse_hidden* # KDE directory preferences .directory # Linux trash folder which might appear on any partition or disk .Trash-* # .nfs files are created when an open file is removed but is still being accessed .nfs* ######################################## # macOS # ######################################## # General .DS_Store .AppleDouble .LSOverride # Icon must end with two \r Icon # Thumbnails ._* # Files that might appear in the root of a volume .DocumentRevisions-V100 .fseventsd .Spotlight-V100 .TemporaryItems .Trashes .VolumeIcon.icns .com.apple.timemachine.donotpresent # Directories potentially created on remote AFP share .AppleDB .AppleDesktop Network Trash Folder Temporary Items .apdisk ######################################## # Windows # ######################################## # Windows thumbnail cache files Thumbs.db ehthumbs.db ehthumbs_vista.db # Dump file *.stackdump # Folder config file [Dd]esktop.ini # Recycle Bin used on file shares $RECYCLE.BIN/ # Windows Installer files *.cab *.msi *.msix *.msm *.msp # Windows shortcuts *.lnk ## Acknowledgements # Many thanks to `https://gitignore.io/`, written and maintained by Joe Blau, which contributed much material to this gitignore file. Project.toml +5 −0 Original line number Diff line number Diff line name = "GRBLumFunctionGEV" authors = ["StefanoCovino"] [compat] julia = "1.10.5" DrWatson = "2.18.0" [deps] DrWatson = "634d3b9d-ee7a-5ddf-bec9-22491ea816e1" README.md 0 → 100644 +30 −0 Original line number Diff line number Diff line # GRBLumFunctionGEV This code base is using the [Julia Language](https://julialang.org/) and [DrWatson](https://juliadynamics.github.io/DrWatson.jl/stable/) to make a reproducible scientific project named > GRBLumFunctionGEV It is authored by StefanoCovino. To (locally) reproduce this project, do the following: 0. Download this code base. Notice that raw data are typically not included in the git-history and may need to be downloaded independently. 1. Open a Julia console and do: ``` julia> using Pkg julia> Pkg.add("DrWatson") # install globally, for using `quickactivate` julia> Pkg.activate("path/to/this/project") julia> Pkg.instantiate() ``` This will install all necessary packages for you to be able to run the scripts and everything should work out of the box, including correctly finding local paths. You may notice that most scripts start with the commands: ```julia using DrWatson @quickactivate "GRBLumFunctionGEV" ``` which auto-activate the project and enable local path handling from DrWatson. Loading
.gitattributes 0 → 100644 +221 −0 Original line number Diff line number Diff line # This global .gitattributes file is adhered to via command: # git config --global core.attributesfile ~/git-global/.gitattributes_global # # Use this file on every device where git development is done. ### ### Auto detect text files and perform LF normalization ### # http://davidlaing.com/2012/09/19/customise-your-gitattributes-to-become-a-git-ninja/ * text=auto ### ### The above will handle all files NOT found below. ### From https://github.com/alexkaratarakis/gitattributes ### ### gitattributes/C++.gitattributes d3b93d4 on Jun 20, 2018 #sources *.c text diff=cpp *.cc text diff=cpp *.cxx text diff=cpp *.cpp text diff=cpp *.c++ text diff=cpp *.hpp text diff=cpp *.h text diff=cpp *.h++ text diff=cpp *.hh text diff=cpp # Compiled Object files *.slo binary *.lo binary *.o binary *.obj binary # Precompiled Headers *.gch binary *.pch binary # Compiled Dynamic libraries *.so binary *.dylib binary *.dll binary # Compiled Static libraries *.lai binary *.la binary *.a binary *.lib binary # Executables *.exe binary *.out binary *.app binary # Other ############## *.exe binary *.num binary *.xls binary *.xlsx binary *.XLS binary *.XLSX binary bin/ binary ### gitattributes/Common.gitattributes 9b38185 on Jun 9, 2018 # Common settings that generally should always be used with your language specific settings # Auto detect text files and perform LF normalization # http://davidlaing.com/2012/09/19/customise-your-gitattributes-to-become-a-git-ninja/ * text=auto # # The above will handle all files NOT found below # # Documents *.doc diff=astextplain *.DOC diff=astextplain *.docx diff=astextplain *.DOCX diff=astextplain *.dot diff=astextplain *.DOT diff=astextplain *.pdf diff=astextplain *.PDF diff=astextplain *.rtf diff=astextplain *.RTF diff=astextplain *.md text diff=markdown *.adoc text *.textile text *.tex text diff=tex *.mustache text *.csv text *.tab text *.tsv text *.sql text # Graphics *.png binary *.jpg binary *.jpeg binary *.gif binary *.tif binary *.tiff binary *.ico binary # SVG treated as an asset (binary) by default. If you want to treat it as text, # comment-out the following line and uncomment the line after. *.svg binary #*.svg text *.eps binary ### gitattributes/Java.gitattributes c08b42f on Mar 29, 2017 # Handle line endings automatically for files detected as text # and leave all files detected as binary untouched. * text=auto # # The above will handle all files NOT found below # # These files are text and should be normalized (Convert crlf => lf) *.css text *.df text *.htm text *.html text *.java text *.js text *.json text *.jsp text *.jspf text *.jspx text *.properties text *.sh text *.tld text *.txt text *.tag text *.tagx text *.xml text *.yml text *.toml text # These files are binary and should be left untouched # (binary is a macro for -text -diff) *.class binary *.dll binary *.ear binary *.gif binary *.ico binary *.jar binary *.jpg binary *.jpeg binary *.png binary *.so binary *.war binary ### gitattributes/Matlab.gitattributes d2539f6 on Dec 3, 2015 # Basic .gitattributes for a MATLAB repo. # This template includes Simulink and MuPAD extensions, in addition # to the MATLAB extensions. # Source files # ============ *.m text *.mu text # Caution: *.m also matches Mathematica packages. # Binary files # ============ *.p binary *.mex* binary *.fig binary *.mat binary *.mdl binary *.slx binary *.mdlp binary *.slxp binary *.sldd binary *.mltbx binary *.mlappinstall binary *.mlpkginstall binary *.mn binary ### gitattributes/Python.gitattributes cbd3af4 on Jun 20, 2018 # Basic .gitattributes for a python repo. # Source files # ============ *.pxd text diff=python *.py text diff=python *.py3 text diff=python *.pyw text diff=python *.pyx text diff=python # Binary files # ============ *.db binary *.p binary *.pkl binary *.pyc binary *.pyd binary *.pyo binary # Note: .db, .p, and .pkl files are associated # with the python modules ``pickle``, ``dbm.*``, # ``shelve``, ``marshal``, ``anydbm``, & ``bsddb`` # (among others). ### gitattributes/R.gitattributes 80aacc1 on Aug 22, 2015 # Basic .gitattributes for a R repo. # Source files # ============ *.Rdata text *.rdb binary *.rds binary *.Rd text *.Rdx binary *.Rmd text *.R text
.github/workflows/CI.yml 0 → 100644 +37 −0 Original line number Diff line number Diff line name: CI on: push: branches: - main tags: '*' pull_request: concurrency: # Skip intermediate builds: always. # Cancel intermediate builds: only if it is a pull request build. group: ${{ github.workflow }}-${{ github.ref }} cancel-in-progress: ${{ startsWith(github.ref, 'refs/pull/') }} jobs: test: name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }} runs-on: ${{ matrix.os }} strategy: fail-fast: false matrix: version: - '1' os: - ubuntu-latest arch: - x64 steps: - uses: actions/checkout@v4 - uses: julia-actions/setup-julia@v1 with: version: ${{ matrix.version }} arch: ${{ matrix.arch }} - uses: julia-actions/cache@v1 - uses: julia-actions/julia-buildpkg@v1 - name: Run tests run: > julia --project=. --color=yes test/runtests.jl
.gitignore 0 → 100644 +416 −0 Original line number Diff line number Diff line ################################################################################ # DrWatson Project Structure # ################################################################################ # Folders to ignore - files may be too large, too many, etc. NOTE: EDIT IF NEEDED. /data /videos /plots /notebooks /_research ################################################################################ # Julia # ################################################################################ # Files generated by invoking Julia with --code-coverage *.jl.cov *.jl.*.cov # Files generated by invoking Julia with --track-allocation *.jl.mem # System-specific files and directories generated by the BinaryProvider and # BinDeps packages. # They contain absolute paths, and so should not be committed deps/deps.jl deps/build.log deps/downloads/ deps/usr/ deps/src/ # Build artifacts for creating documentation generated by the Documenter package docs/build/ docs/site/ ################################################################################ # Jupyter Notebook # ################################################################################ .ipynb_checkpoints */.ipynb_checkpoints/* ################################################################################ # Microsoft Office # ################################################################################ *.tmp # Word temporary ~$*.doc* # Word Auto Backup File Backup of *.doc* # Excel temporary ~$*.xls* # Excel Backup File *.xlk # PowerPoint temporary ~$*.ppt* ################################################################################ # LaTeX # ################################################################################ ## Core latex/pdflatex auxiliary files: *.aux *.lof *.log *.lot *.fls *.out *.toc *.fmt *.fot *.cb *.cb2 .*.lb ## Intermediate documents: *.dvi *.xdv *-converted-to.* # these rules will exclude image files for figures, et cetera... # *.ps # *.eps # *.pdf ## Generated if empty string given at "Please type another file name for output:" .pdf ## Bibliography auxiliary files (bibtex/biblatex/biber): *.bbl *.bcf *.blg *-blx.aux *-blx.bib *.run.xml ## Build tool auxiliary files: *.fdb_latexmk *.synctex *.synctex(busy) *.synctex.gz *.synctex.gz(busy) *.pdfsync ## Build tool directories for auxiliary files # latexrun latex.out/ ## Auxiliary and intermediate files from other packages: # algorithms *.alg *.loa # achemso acs-*.bib # amsthm *.thm # beamer *.nav *.pre *.snm *.vrb # changes *.soc # comment *.cut # cprotect *.cpt # elsarticle (documentclass of Elsevier journals) *.spl # endnotes *.ent # fixme *.lox # feynmf/feynmp *.mf *.mp *.t[1-9] *.t[1-9][0-9] *.tfm #(r)(e)ledmac/(r)(e)ledpar *.end *.?end *.[1-9] *.[1-9][0-9] *.[1-9][0-9][0-9] *.[1-9]R *.[1-9][0-9]R *.[1-9][0-9][0-9]R *.eledsec[1-9] *.eledsec[1-9]R *.eledsec[1-9][0-9] *.eledsec[1-9][0-9]R *.eledsec[1-9][0-9][0-9] *.eledsec[1-9][0-9][0-9]R # glossaries *.acn *.acr *.glg *.glo *.gls *.glsdefs # gnuplottex *-gnuplottex-* # gregoriotex *.gaux *.gtex # htlatex *.4ct *.4tc *.idv *.lg *.trc *.xref # hyperref *.brf # knitr *-concordance.tex # listings *.lol # luatexja-ruby *.ltjruby # makeidx *.idx *.ilg *.ind *.ist # minitoc *.maf *.mlf *.mlt *.mtc[0-9]* *.slf[0-9]* *.slt[0-9]* *.stc[0-9]* # minted _minted* *.pyg # morewrites *.mw # nomencl *.nlg *.nlo *.nls # pax *.pax # pdfpcnotes *.pdfpc # sagetex *.sagetex.sage *.sagetex.py *.sagetex.scmd # scrwfile *.wrt # sympy *.sout *.sympy sympy-plots-for-*.tex/ # pdfcomment *.upa *.upb # pythontex *.pytxcode pythontex-files-*/ # tcolorbox *.listing # thmtools *.loe # TikZ & PGF *.dpth *.md5 *.auxlock # todonotes *.tdo # vhistory *.hst *.ver # easy-todo *.lod # xcolor *.xcp # xmpincl *.xmpi # xindy *.xdy # xypic precompiled matrices *.xyc # endfloat *.ttt *.fff # Latexian TSWLatexianTemp* ## Editors: # WinEdt *.bak *.sav # Texpad .texpadtmp # LyX *.lyx~ # Kile *.backup # KBibTeX *~[0-9]* # auto folder when using emacs and auctex ./auto/* *.el # expex forward references with \gathertags *-tags.tex # standalone packages *.sta ### LaTeX Patch ### # glossaries *.glstex ################################################################################ # Operating systems # ################################################################################ ######################################## # Linux # ######################################## *~ # temporary files which can be created if a process still has a handle open of # a deleted file .fuse_hidden* # KDE directory preferences .directory # Linux trash folder which might appear on any partition or disk .Trash-* # .nfs files are created when an open file is removed but is still being accessed .nfs* ######################################## # macOS # ######################################## # General .DS_Store .AppleDouble .LSOverride # Icon must end with two \r Icon # Thumbnails ._* # Files that might appear in the root of a volume .DocumentRevisions-V100 .fseventsd .Spotlight-V100 .TemporaryItems .Trashes .VolumeIcon.icns .com.apple.timemachine.donotpresent # Directories potentially created on remote AFP share .AppleDB .AppleDesktop Network Trash Folder Temporary Items .apdisk ######################################## # Windows # ######################################## # Windows thumbnail cache files Thumbs.db ehthumbs.db ehthumbs_vista.db # Dump file *.stackdump # Folder config file [Dd]esktop.ini # Recycle Bin used on file shares $RECYCLE.BIN/ # Windows Installer files *.cab *.msi *.msix *.msm *.msp # Windows shortcuts *.lnk ## Acknowledgements # Many thanks to `https://gitignore.io/`, written and maintained by Joe Blau, which contributed much material to this gitignore file.
Project.toml +5 −0 Original line number Diff line number Diff line name = "GRBLumFunctionGEV" authors = ["StefanoCovino"] [compat] julia = "1.10.5" DrWatson = "2.18.0" [deps] DrWatson = "634d3b9d-ee7a-5ddf-bec9-22491ea816e1"
README.md 0 → 100644 +30 −0 Original line number Diff line number Diff line # GRBLumFunctionGEV This code base is using the [Julia Language](https://julialang.org/) and [DrWatson](https://juliadynamics.github.io/DrWatson.jl/stable/) to make a reproducible scientific project named > GRBLumFunctionGEV It is authored by StefanoCovino. To (locally) reproduce this project, do the following: 0. Download this code base. Notice that raw data are typically not included in the git-history and may need to be downloaded independently. 1. Open a Julia console and do: ``` julia> using Pkg julia> Pkg.add("DrWatson") # install globally, for using `quickactivate` julia> Pkg.activate("path/to/this/project") julia> Pkg.instantiate() ``` This will install all necessary packages for you to be able to run the scripts and everything should work out of the box, including correctly finding local paths. You may notice that most scripts start with the commands: ```julia using DrWatson @quickactivate "GRBLumFunctionGEV" ``` which auto-activate the project and enable local path handling from DrWatson.
