Added minimaldesktop GUI to the base container v3.10 and added the prefactor3 GUI version. (a1bd63f7) · Commits · lofarit / containers

base_v3/Dockerfile

+59 −4

Original line number	Diff line number	Diff line
		@@ -16,6 +16,8 @@ RUN apt-get install git curl sudo nano -y

		RUN cd /opt/ && git clone https://github.com/lofar-astron/LOFARBeam.git
		RUN mkdir /opt/LOFARBeam/build && cd /opt/LOFARBeam/build && cmake -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft -DPYTHON_EXECUTABLE=$(which python) -DCASACORE_INCLUDE_DIRS=/opt/lofarsoft/include/casacore/ -DCASACORE_LIBRARIES=/opt/lofarsoft/lib/ -DCASACORE_ROOT_DIR=/opt/lofarsoft/ ../ && make -j16 && make install


		#------------------------
		# Lofar user
		#------------------------
		@@ -37,10 +39,63 @@ COPY data/input_data /input_data
		COPY data/output_data /output_data
		RUN chown lofar:lofar /home/lofar && chown -R lofar:lofar /input_data && chown -R lofar:lofar /output_data

		# This is required mainly for Singularity
		RUN mv /home/lofar /home/vanilla_lofar
		RUN ln -s /tmp/lofarhome /home/lofar
		RUN rm -rf /tmp/lofarhome

		#----------------------
		# Minimal Desktop
		#----------------------

		# Utilities
		RUN apt-get install -y telnet unzip wget supervisor build-essential python-dev git-core openjdk-8-jre

		# Global Supervisord conf
		COPY files/supervisord.conf /etc/supervisor/

		# Install xvfb that triggers minimal install of X base packages and xterm
		RUN apt-get install xvfb xterm -y

		# Install base packages for VNC server and headless desktop (2)
		RUN cd /opt && wget https://bintray.com/tigervnc/stable/download_file?file_path=tigervnc-1.8.0.x86_64.tar.gz -O tigervnc-1.8.0.x86_64.tar.gz \
		&& tar -zxvf tigervnc-1.8.0.x86_64.tar.gz \
		&& mv tigervnc-1.8.0.x86_64 tigervnc

		# Supervisord configuration
		COPY files/supervisord_vnc.conf /etc/supervisor/conf.d/
		COPY files/run_vnc.sh /etc/supervisor/conf.d/
		COPY files/run_novnc.sh /etc/supervisor/conf.d/
		RUN chmod 755 /etc/supervisor/conf.d/run_vnc.sh
		RUN chmod 755 /etc/supervisor/conf.d/run_novnc.sh

		# Web VNC (noVNC) v0.6.1.
		# NOTE: this is a custom version from Doro Wu (fcwu.tw@gmail.com).
		# TODO: Check differences and maybe move to 0.6.2
		COPY files/noVNC.tar.gz /usr/lib/
		RUN cd /usr/lib/ && tar -zxvf noVNC.tar.gz
		COPY files/index.html /usr/lib/noVNC

		RUN apt-get install -y net-tools

		# Supervisord configuration
		COPY files/supervisord_novnc.conf /etc/supervisor/conf.d/

		# X environment setup/startup
		RUN apt-get install fluxbox -y
		COPY files/xstartup /opt/tigervnc/
		RUN chmod 755 /opt/tigervnc/xstartup

		# Prepare for logs
		RUN mkdir /home/lofar/.logs && chown lofar:lofar /home/lofar/.logs

		# Add fluxbox customisations
		COPY files/dot_fluxbox /home/lofar/.fluxbox
		RUN chown -R lofar:lofar /home/lofar/.fluxbox
		COPY files/background.jpg /usr/share/images/fluxbox/background.jpg

		# Rename lofar home folder as a "vanilla" home folder
		RUN mv /home/lofar /lofar_home_vanilla

		# Give write access to anyone to the home folder so the entrypoint will be able
		# to copy over the /home/matauser_vanilla into /home/lofar (for Singularity)
		RUN chmod 777 /home


		#----------------------

base_v3/entrypoint.sh

+114 −38

Original line number	Diff line number	Diff line
		#!/bin/bash

		# Exit on any error. More complex thing could be done in future
		# Exit on any error. More complex stuff could be done in future
		# (see https://stackoverflow.com/questions/4381618/exit-a-script-on-error)
		set -e


		if [ "x$SAFE_MODE" == "xTrue" ]; then

		echo ""
		echo "[INFO] Not executing entrypoint as we are in safe mode, just opening a Bash shell."
		exec /bin/bash

		else

		echo ""
		echo "[INFO] Executing entrypoint..."

		#echo "[INFO] Sourcing env in /opt/lofarsoft/lofarinit.sh..."
		source /opt/lofarsoft/lofarinit.sh
		if [ "x$GUI" == "xTrue" ]; then
		if [ "x$BASE_PORT" == "x" ]; then
		echo "[INFO] No task base port set, will set noVNC port 8590 and VNC port 5900 with desktop id \"0\""
		else
		echo "[INFO] Task base port set, will set noVNC port $BASE_PORT and noVNC port $(($BASE_PORT+1)) with desktop id \"$(($BASE_PORT-5900+1))\""
		fi
		fi

		#---------------------
		# Setup home
		#---------------------

		if [ -f "/home/lofar/.initialized" ]; then
		:
		else
		echo "[INFO] Setting up home"
		mkdir -p /home/lofar

		# Copy over vanilla home contents
		for x in /lofar_home_vanilla/* /lofar_home_vanilla/.[!.]* /lofar_home_vanilla/..?*; do
		if [ -e "$x" ]; then cp -a "$x" /home/lofar/; fi
		done

		# Mark as initialized
		touch /home/lofar/.initialized
		fi


		#---------------------
		# Save env
		#---------------------
		echo "[INFO] Dumping env"

		# Save env vars for later usage (e.g. ssh)

		env \| \
		while read env_var; do
		if [[ $env_var == HOME\=* ]]; then
		: # Skip HOME var
		elif [[ $env_var == PWD\=* ]]; then
		: # Skip PWD var
		else
		echo "export $env_var" >> /tmp/env.sh
		fi
		done

		#---------------------
		# VNC Password
		#---------------------
		if [ "x$GUI" == "xTrue" ]; then
		if [ "x$AUTH_PASS" != "x" ]; then
		echo "[INFO] Setting up VNC password..."
		mkdir -p /home/lofar/.vnc
		/opt/tigervnc/usr/bin/vncpasswd -f <<< $AUTH_PASS > /home/lofar/.vnc/passwd
		chmod 600 /home/lofar/.vnc/passwd
		export VNC_AUTH=True
		else
		echo "[INFO] Not setting up any VNC password"

		fi
		fi

		echo "[INFO] Creating /tmp/lofarhome to be used as lofar home"
		mkdir /tmp/lofarhome

		echo "[INFO] Initialising /tmp/lofarhome with configuration files"
		cp -aT /home/vanilla_lofar /tmp/lofarhome
		echo "[INFO] Initializing /tmp/lofarhome with configuration files"
		cp -aT /lofar_home_vanilla /tmp/lofarhome

		echo "[INFO] Moving to /home/lofar and setting as home"
		cd /home/lofar
		@@ -23,15 +91,22 @@ export HOME=/home/lofar
		echo "[INFO] Setting new prompt @$CONTAINER_NAME container"
		echo 'export PS1="${debian_chroot:+($debian_chroot)}\u@$CONTAINER_NAME@\h:\w\$ "' >> /tmp/lofarhome/.bashrc

		echo "[INFO] Sourcing env in /opt/lofarsoft/lofarinit.sh..."
		source /opt/lofarsoft/lofarinit.sh


		# Set entrypoint command
		if [ "x$@" == "x" ]; then
		if [ "x$GUI" == "xTrue" ]; then
		COMMAND="supervisord -c /etc/supervisor/supervisord.conf"
		else
		COMMAND="/bin/bash"
		fi
		else
		COMMAND="$@"
		fi



		# Start!
		echo -n "[INFO] Will execute entrypoint command: "
		echo $COMMAND
		@@ -51,3 +126,4 @@ echo ""

		exec $COMMAND

		fi

base_v3/files/background.jpg

0 → 100644

+9.96 KiB

Loading image diff...

base_v3/files/dot_fluxbox/apps

0 → 100644

+4 −0

Original line number	Diff line number	Diff line
		[app] (name=fbrun)
		[Position] (WINCENTER) {0 0}
		[Layer] {2}
		[end]

base_v3/files/dot_fluxbox/init

0 → 100644

+76 −0

Original line number	Diff line number	Diff line
		session.screen0.tabs.usePixmap: true
		session.screen0.tabs.maxOver: false
		session.screen0.tabs.intitlebar: true
		session.screen0.clientMenu.usePixmap: true
		session.screen0.iconbar.usePixmap: true
		session.screen0.iconbar.iconTextPadding: 10
		session.screen0.iconbar.iconWidth: 128
		session.screen0.iconbar.alignment: Relative
		session.screen0.iconbar.mode: {static groups} (workspace)
		session.screen0.toolbar.visible: true
		session.screen0.toolbar.height: 0
		session.screen0.toolbar.onhead: 1
		session.screen0.toolbar.widthPercent: 100
		session.screen0.toolbar.alpha: 255
		session.screen0.toolbar.maxOver: false
		session.screen0.toolbar.autoHide: false
		session.screen0.toolbar.layer: Dock
		session.screen0.toolbar.placement: BottomCenter
		#session.screen0.toolbar.tools: prevworkspace, workspacename, nextworkspace, clock, prevwindow, nextwindow, iconbar, systemtray
		session.screen0.toolbar.tools: iconbar, systemtray
		session.screen0.menu.alpha: 255
		session.screen0.tab.placement: TopLeft
		session.screen0.tab.width: 64
		session.screen0.titlebar.left: Stick
		session.screen0.titlebar.right: Minimize Maximize Close
		session.screen0.window.focus.alpha: 255
		session.screen0.window.unfocus.alpha: 255
		session.screen0.slit.alpha: 255
		session.screen0.slit.maxOver: false
		session.screen0.slit.placement: RightBottom
		session.screen0.slit.autoHide: false
		session.screen0.slit.acceptKdeDockapps: true
		session.screen0.slit.onhead: 0
		session.screen0.slit.layer: Dock
		session.screen0.colPlacementDirection: TopToBottom
		session.screen0.tabFocusModel: ClickToTabFocus
		session.screen0.autoRaise: true
		session.screen0.maxDisableMove: false
		session.screen0.edgeSnapThreshold: 10
		session.screen0.tooltipDelay: 500
		session.screen0.opaqueMove: true
		session.screen0.windowPlacement: RowMinOverlapPlacement
		session.screen0.focusNewWindows: true
		session.screen0.clickRaises: true
		session.screen0.maxDisableResize: false
		session.screen0.windowMenu: /home/lofar/.fluxbox/windowmenu
		session.screen0.allowRemoteActions: false
		session.screen0.strftimeFormat: %d %b, %a %02k:%M:%S
		session.screen0.focusSameHead: false
		session.screen0.workspacewarping: true
		session.screen0.fullMaximization: false
		session.screen0.defaultDeco: NORMAL
		session.screen0.noFocusWhileTypingDelay: 0
		session.screen0.menuDelay: 200
		session.screen0.workspaceNames: Workspace 1,Workspace 2,Workspace 3,Workspace 4,
		session.screen0.rowPlacementDirection: LeftToRight
		session.screen0.focusModel: ClickFocus
		session.screen0.showwindowposition: false
		session.screen0.maxIgnoreIncrement: true
		session.screen0.workspaces: 1
		session.styleOverlay: /home/lofar/.fluxbox/overlay
		session.keyFile: ~/.fluxbox/keys
		session.cacheMax: 200
		session.tabsAttachArea: Window
		session.slitlistFile: /home/lofar/.fluxbox/slitlist
		session.forcePseudoTransparency: false
		session.tabPadding: 0
		session.colorsPerChannel: 4
		session.styleFile: /usr/share/fluxbox/styles//ubuntu-light
		session.autoRaiseDelay: 250
		session.cacheLife: 5
		session.appsFile: /home/lofar/.fluxbox/apps
		session.ignoreBorder: false
		session.configVersion: 13
		session.doubleClickInterval: 250
		session.menuFile: ~/.fluxbox/menu