Commit 4644157a authored by Antonio Ragagnin's avatar Antonio Ragagnin 💬
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Update run_pm_dmo_NFW_fixed_timestep.md

parent 15c6caa3
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+28 −21
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@@ -5,15 +5,22 @@ In this example we will use create IC that sample a **NFW profile** and evolve i
Here is a first benefit of a modular code: since in `hotwheels `PM is a self-contained module, we can instantiate it an arbitrary number of times. So one can stack seven [PLACEHIGHRESREGION](https://wwwmpa.mpa-garching.mpg.de/gadget4/03_simtypes/) 
 on smaller and smaller regions (a sort of refined mesh) on top of a sampled NFW halo  and use PM-only to **get accurate force down to a kpc** (see image).

Install the PM module (will install core,IO, and timestep as dependencies):

Note that to run this module you need access to hotwheels **core, IO, PM,** and **integrate** components. Note that `hotwheels` do not provide parameter or config files. It is up to the user to initalise its sub-library components and connect them.
```bash
pip install 'git+ssh://git@git.ia2.inaf.it/hotwheels/PM.git@v0.0.0alpha'
```

And you can run this code:

```python
import numpy as np, os, matplotlib as plt
from hotwheels_core import *
from hotwheels_pm import *
from hotwheels_integrate import *
from hotwheels_io import *
from hotwheels.utils import *
from hotwheels.wrap import *
from hotwheels.soas import *
from hotwheels.PM import *
from hotwheels.integrate import *
from hotwheels.io import *

#
# Step 1: Configure components
@@ -21,14 +28,14 @@ from hotwheels_io import *
# Configurations are passed to constructors to compile the underlying C libraries.
#

mpi = hwc.MPI().init() # Initialize MPI
mpi = MPI().init() # Initialize MPI
mym = MyMalloc(alloc_bytes=int(2e9)) # Configure memory allocator with 2GB
p = SoA(maxpart=int(1e5), mem=mym) # Configure P to hold 1e5 particles
soas = SoAs(p, mem=mym) # Add P to a multi-type SoA container
soas = SoAs(p) # Add P to a multi-type SoA container
# Set up a fixed time-step integrator from 0 to 1 Gyr
# Conversion factor for Gyr to internal units
gyr_to_cu = 3.086e+16 / (1e9 * 3600 * 24 * 365)
ts = integrate.FixedTimeStep(
ts = FixedTimeStep(
    soas,
    G=43007.1,  # Gravitational constant in specific units
    t_from=0.,
@@ -36,7 +43,7 @@ ts = integrate.FixedTimeStep(
    MPI=mpi
)
# Initialize a NFW profile with scale radius `rs=100` and density `rho0=1e-6`
ic = NFWIC(rs=100., rho0=1e-6, rs_factor=10.)
ic = NFWIC(r_s=100., rho_0=1e-6, r_max_f=10.)
# Configure a refined PM grid with 7 stacked high-resolution regions
pm = SuperHiResPM( #wrapper to the PM C library
    soas=soas,
@@ -59,13 +66,13 @@ if mpi.rank == 0: # Master rank handles compilation
#

with (
    utils.Panic(Build=build) as panic,  # Attach panic handler
    utils.Timer(Build=build) as timer,  # Attach timer handler
    Panic(Build=build) as panic,  # Attach panic handler
    Timer(Build=build) as timer,  # Attach timer handler
    build.enter(debug=mpi.rank == 0),  # Parse compiled objects
    mpi.enter(pm),  # Initialize MPI in the PM module
    mym.enter(*build.components),  # Allocate 2GB memory
    p,  # Allocate particle data structure in MyMalloc
    ic.enter(p, mpi.ranks, p.get_maxpart()),  # Sample NFW profile
    ic.enter(p, mpi.ranks, p.get_maxpart(), ts.G),  # Sample NFW profile
    pm,  # Initialize PM and compute first accelerations
    ts  # Compute DriftTables if needed
):
@@ -73,7 +80,6 @@ with (
    #
    # Step 3: Main simulation loop
    #

    while ts.time < ts.time_end:
        ts.find_timesteps()  # Determine timesteps
        ts.do_first_halfstep_kick()  # First kick (includes drift/kick callbacks)
@@ -90,3 +96,4 @@ with (
            plt.close(fig)

print('Simulation finished')
```
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