Set up file structure to use autoconf

build/libnptm/*

containers/singularity/*.sif

doc/build/*

src/aclocal.m4

src/autom4te.cache

src/config.*

src/configure

src/configure~

src/libtool

src/m4

src/Makefile

src/Makefile.in

src/*/.deps

src/*/objects/*

src/*/dynobjects/*

AUTOMAKE_OPTIONS=subdir-objects

lib_LTLIBRARIES=libnptm.la

libnptm_la_SOURCES=libnptm/algebraic.cpp libnptm/clu_subs.cpp libnptm/Commons.cpp libnptm/Configuration.cpp libnptm/file_io.cpp libnptm/lapack_calls.cpp libnptm/logging.cpp libnptm/magma_calls.cpp libnptm/Parsers.cpp libnptm/sph_subs.cpp libnptm/tfrfme.cpp libnptm/TransitionMatrix.cpp libnptm/tra_subs.cpp libnptm/types.cpp

bin_PROGRAMS=edfb_clu clu np_cluster edfb_sph sph np_sphere frfme lffft np_trapping

edfb_clu_SOURCES=cluster/edfb_clu.f

clu_SOURCES=cluster/clu.f

np_cluster_SOURCES=cluster/np_cluster.cpp cluster/cluster.cpp

edfb_sph_SOURCES=sphere/edfb_sph.f

sph_SOURCES=sphere/sph.f

np_sphere_SOURCES=sphere/np_sphere.cpp sphere/sphere.cpp

frfme_SOURCES=trapping/frfme.f

lffft_SOURCES=trapping/lffft.f

np_trapping_SOURCES=trapping/np_trapping.cpp trapping/cfrfme.cpp trapping/clffft.cpp

check_PROGRAMS=test_TEDF test_TTMS

test_TEDF_SOURCES=testing/test_TEDF.cpp

test_TTMS_SOURCES=testing/test_TTMS.cpp

# CAPABILITY TESTING MACROS

# END CAPABILITY TESTING MACROS

# autoconf setup initialization

AC_INIT([np_tmcode], [8.04], [giovanni.lamura@inaf.it])

# Folder structure safety check

AC_CONFIG_SRCDIR([libnptm/TransitionMatrix.cpp])

# Auxiliary build folder

AC_CONFIG_AUX_DIR([../build/aux])

# automake initialization

AM_INIT_AUTOMAKE([-Wall -Werror foreign])

# Compiler detection

AM_PROG_AR

AC_PROG_F77([mpif90 gfortran f77])

AC_PROG_CXX([mpicxx g++ clang])

# Libtool initialization

LT_INIT

# Environment setup

FFLAGS="-std=legacy -O3"

CXXFLAGS="-O3 -ggdb -Wno-format-contains-nul"

SUBDIRS="cluster libnptm sphere testing trapping"

AS_IF(

	[test "x$HDF5_INCLUDE" = "x"],

	[export HDF5_INCLUDE=/usr/include/hdf5/serial],

	[AC_MSG_NOTICE(["HDF5_INCLUDE=$HDF5_INCLUDE"])]

)

# Check for required headers

AC_CHECK_HEADER(

	[$HDF5_INCLUDE/hdf5.h],

	,

	AC_MSG_ERROR(["Could not find HDF5 headers!]),

	)

# Send output to Makefiles

AC_CONFIG_FILES([Makefile])

# Generate the output

AC_OUTPUT