Commit 884f6c11 authored by Giovanni La Mura's avatar Giovanni La Mura
Browse files

Merge branch 'setup_doxygen' into 'master'

Setup doxygen

See merge request giacomo.mulas/np_tmcode!3
parents 22bf485a b525842a
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build/cluster/*
build/sphere/*
build/trapping/*
doc/build/*

doc/src/README.md

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# Folder instructions

This directory contains the material to build the project documentation with `doxygen`.

## Instructions

The project documentation is managed by `doxygen`, a documentation generator that is able to extract documents directly from properly formatted comment sections of the source code. To build a local instance of project documents, make sure that you have `doxygen` installed, then `cd` into the document source folder (the folder containing the `conf.dox` file, specifically `np_tmcode/doc/src`) and finally run:
```
doxygen conf.dox
```

`doxygen` will automatically build the HTML structure to cover all the documented source code and it will additionally provide the fundamental structure to prepare a LaTeX formatted version of the documents. These two outputs will be placed, respectively, under the folders `np_tmcode/doc/build/html` and `np_tmcode/doc/build/latex`.
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doc/src/config.dox

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src/sphere/List.h

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/*! \file List.h
 */

#ifndef LIST_OUT_OF_BOUNDS_EXCEPTION
#define LIST_OUT_OF_BOUNDS_EXCEPTION 1
#endif

/**
 * \brief A class to represent dynamic lists.
 *
 * This class helps in the creation and management of dynamic lists of
 * objects, whose size is not known in advance. List offers the advantage
 * of saving memory, since only the necessary space will be allocated,
 * but it has the disadvantage of creating an object which is not contiguous
 * in memory and, therefore, is very inefficient for subsequent manipulation.
 *
 * For this reason, the best use of List objects is to collect all the
 * desired members and then, once the element number is known, to convert
 * the List to C array, by calling List.to_array(). This function returns
 * a contiguous array of type T[SIZE] that can be used for indexed access.
 */
template<class T> class List {
 protected:
  int size; //!< Size of the List.
  struct element {
    T value; //!< Value of the list element.
    element* p_prev; //!< Pointer to the previous element in the list.
  }; //!< List element connector.
  element *current, //!< Pointer to element affected by last operation.
    *first, //!< Pointer to the first element in the List.
    *last; //!< Pointer to the last element in the List.

 public:
  /*! \brief List constructor.
   *
   * Use the constructor List<T>([int length]) to create a new list with a given
   * size. If the required size is not known in advance, it is recommended
   * to create a List with SIZE=1 (this is the default behavior) and then
   * to append the elements dynamically, using List.append(ELEMENT) (where
   * ELEMENT needs to be a value of type T, corresponding to the class
   * template specialization). Note that, due to the default behavior, the
   * following calls are equivalent and they both produce an integer List
   * with size equal to 1:
   *
   * a = List<int>(1);
   *
   * b = List<int>();
   *
   * \param length: `int` The size of the list to be constructed [OPTIONAL, default=1].
   */
  List(int length = 1) {
    size = length;
    first = new element;
    first->p_prev = NULL;
    element *current = first;
    element *p_prev = first;
    for (int i = 1; i < size; i++) {
      current = new element;
      current->p_prev = p_prev;
      p_prev = current;
    }
    last = current;
  }

  ~List() {
    current = last;
    element *old;
    while (current->p_prev) {
      old = current;
      current = old->p_prev;
      delete old;
    }
  }
  
  /*! \brief Append an element at the end of the list.
   *
   * To dynamically create a list whose size is not known in advance,
   * elements can be appended in an iterative way. Note that element
   * manipulation is much more effective in a C array than in a List
   * object. For this reason, after the List has been created, it is
   * strongly advised to convert it to a C array by calling the function
   * List.to_array().
   *
   * \param value: `T` The value of the element to be appended.
   */
  void append(T value) {
    element *p_prev = last;
    current = new element;
    current->value = value;
    current->p_prev = p_prev;
    last = current;
    size++;
  }

  /*! \brief Get the element at given index.
   *
   * Get the element specified by the index argument. The first element
   * has index 0 and the last one has index [size - 1].
   *
   * \param index: `int` The index of the element to be retrieved. 0 for first.
   * \return value `T` The value of the element at the requested position.
   * \throws LIST_OUT_OF_BOUNDS_EXCEPTION: Raised if the index is out of bounds.
   */
  T get(int index) {
    if (index < 0 || index > size - 1) {
      throw LIST_OUT_OF_BOUNDS_EXCEPTION;
    }
    current = last;
    for (int i = size - 1; i > index; i--) current = current->p_prev;
    return current->value;
  }

  /*! \brief Get the number of elements in the list.
   *
   * Get the number of elements currently stored in the list.
   *
   * \return size `int` The size of the list.
   */
  int length() {
    return size;
  }

  /*! \brief Set an element by index and value.
   *
   * Set the element at the position specified by the index to the value
   * specified by the value argument.
   *
   * \param index: `int` The index of the element to be set. 0 for first.
   * \param value: `int` The value to store in the pointed element.
   * \throws LIST_OUT_OF_BOUNDS_EXCEPTION: Raised if the index is out of bounds.
   */
  void set(int index, T value) {
    if (index < 0 || index > size - 1) {
      throw LIST_OUT_OF_BOUNDS_EXCEPTION;
    }
    current = last;
    for (int i = size - 1; i > index; i--) current = current->p_prev;
    current->value = value;
  }

  /*! \brief Convert the list to a C array.
   *
   * The List object is useful to dynamically manage a set of objects
   * when the number of elements is not known in advance. However, the
   * resulting object is not contiguosly stored in memory. As a result,
   * access to specific elements in the middle of the list is not very
   * effective, because the list needs to be walked every time up to
   * the desired position. In order to avoid this, List.to_array() makes
   * a conversion from List to C array, returning a contiguous object,
   * where indexed access can be used.
   *
   * \return array `T*` A C array of type T and size equal to the List size.
   */
  T* to_array() {
    T *array = new T[size];
    current = last;
    for (int i = size; i > 0; i--) {
      array[i - 1] = current->value;
      current = current->p_prev;
    }
    return array;
  }
};

src/sphere/edfb.cpp

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/*! \file edfb.cpp
 */

#include <cstdio>
#include <cmath>
#include <complex>
#include <cstring>
#include <iostream>
#include <fstream>
#include "List.h"

using namespace std;

/*! \brief Load a text file as a sequence of strings in memory.
 *
 * The configuration of the field expansion code in FORTRAN uses
 * shared memory access and file I/O operations managed by different
 * functions. Although this approach could be theoretically replicated,
 * it is more convenient to handle input and output to distinct files
 * using specific functions. load_file() helps in the task of handling
 * input such as configuration files or text data structures that need
 * to be loaded entirely. The function performs a line-by line scan of
 * the input file and returns an array of strings that can be later
 * parsed and ingested by the concerned code blocks. An optional pointer
 * to integer allows the function to keep track of the number of file
 * lines that were read, if needed.
 *
 * \param file_name: `string` The path of the file to be read.
 * \param count: `int*` Pointer to an integer recording the number of
 * read lines [OPTIONAL, default=NULL].
 * \return array_lines `string*` An array of strings, one for each input
 * file line.
 */
string *load_file(string file_name, int *count);

/*! \brief C++ implementation of EDFB
 *
 *  This code aims at replicating the original work-flow in C++.
 */
int main(int argc, char **argv) {
  // Common variables set
  complex<double> *dc0, ***dc0m;
  double *ros, **rcf;
  int *iog, *nshl;
  double *xiv, *wns, *wls, *pus, *evs, *vss;
  string vns[5];

  int max_nsh = 0; // A helper variable to set the size of dc0m
  int ici;

  // Input file reading section
  int num_lines = 0;
  int last_read_line = 0; // Keep track of where the input stream was left
  string *file_lines = load_file("../../test_data/sphere/DEDFB", &num_lines);

  // Configuration code
  int nsph, ies;
  sscanf(file_lines[last_read_line].c_str(), " %d %d", &nsph, &ies);
  if (ies != 0) ies = 1;
  double exdc, wp, xip;
  int exdc_exp, wp_exp, xip_exp;
  int idfc, nxi, instpc, insn;
  int nsh;
  sscanf(
    file_lines[++last_read_line].c_str(),
    " %9lf D%d %9lf D%d %8lf D%d %d %d %d %d",
    &exdc, &exdc_exp,
    &wp, &wp_exp,
    &xip, &xip_exp,
    &idfc, &nxi, &instpc, &insn
  );
  exdc *= pow(10.0, exdc_exp);
  wp *= pow(10.0, wp_exp);
  xip *= pow(10.0, xip_exp);

  FILE *output = fopen("c_OEDFB", "w");
  // FORTRAN starts subroutine INXI at this point
  const double pigt = acos(0.0) * 4.0;
  const double evc = 6.5821188e-16;
  if (idfc >= 0) {
    // Not walked by default input data
    // This part of the code in not tested
    vss = new double[nxi];
    xiv = new double[nxi];
    pus = new double[nxi];
    evs = new double[nxi];
    wns = new double[nxi];
    wls = new double[nxi];
    if (instpc == 0) { // The variable vector is explicitly defined
      double vs;
      int vs_exp;
      for (int jxi_r = 0; jxi_r < nxi; jxi_r++) {
	sscanf(file_lines[++last_read_line].c_str(), " %lf D%d", &vs, &vs_exp);
	vs *= pow(10.0, vs_exp);
	vss[jxi_r] = vs;
      }
      switch (insn) {
      case 1: //xi vector definition
	vns[insn - 1] = "XIV";
	fprintf(output, "  JXI     XIV          WNS          WLS          PUS          EVS\n");
	for (int jxi210w = 0; jxi210w < nxi; jxi210w++) {
	  xiv[jxi210w] = vss[jxi210w];
	  pus[jxi210w] = xiv[jxi210w] * wp;
	  evs[jxi210w] = pus[jxi210w] * evc;
	  wns[jxi210w] = pus[jxi210w] / 3.0e8;
	  wls[jxi210w] = pigt / wns[jxi210w];
	  fprintf(
	    output,
	    "%5d %13.4lE %13.4lE %13.4lE %13.4lE %13.4lE\n",
	    (jxi210w + 1),
	    xiv[jxi210w],
	    wns[jxi210w],
	    wls[jxi210w],
	    pus[jxi210w],
	    evs[jxi210w]
	  );
	}
	break;
      case 2: //wave number vector definition
	vns[insn - 1] = "WNS";
	fprintf(output, "  JXI     WNS          WLS          PUS          EVS          XIV\n");
	for (int jxi230w = 0; jxi230w < nxi; jxi230w++) {
	  wns[jxi230w] = vss[jxi230w];
	  wls[jxi230w] = pigt / wns[jxi230w];
	  xiv[jxi230w] = 3.0e8 * wns[jxi230w] / wp;
	  pus[jxi230w] = xiv[jxi230w] * wp;
	  evs[jxi230w] = pus[jxi230w] * evc;
	  fprintf(
	    output,
	    "%5d %13.4lE %13.4lE %13.4lE %13.4lE %13.4lE\n",
	    (jxi230w + 1),
	    wns[jxi230w],
	    wls[jxi230w],
	    pus[jxi230w],
	    evs[jxi230w],
	    xiv[jxi230w]
	  );
	}
	break;
      case 3: //wavelength vector definition
	vns[insn - 1] = "WLS";
	fprintf(output, "  JXI     WLS          WNS          PUS          EVS          XIV\n");
	for (int jxi250w = 0; jxi250w < nxi; jxi250w++) {
	  wls[jxi250w] = vss[jxi250w];
	  wns[jxi250w] = pigt / wls[jxi250w];
	  xiv[jxi250w] = 3.0e8 * wns[jxi250w] / wp;
	  pus[jxi250w] = xiv[jxi250w] * wp;
	  evs[jxi250w] = pus[jxi250w] * evc;
	  fprintf(
	    output,
	    "%5d %13.4lE %13.4lE %13.4lE %13.4lE %13.4lE\n",
	    (jxi250w + 1),
	    wls[jxi250w],
	    wns[jxi250w],
	    pus[jxi250w],
	    evs[jxi250w],
	    xiv[jxi250w]
	  );
	}
	break;
      case 4: //pu vector definition
	vns[insn - 1] = "PUS";
	fprintf(output, "  JXI     PUS          WNS          WLS          EVS          XIV\n");
	for (int jxi270w = 0; jxi270w < nxi; jxi270w++) {
	  pus[jxi270w] = vss[jxi270w];
	  xiv[jxi270w] = pus[jxi270w] / wp;
	  wns[jxi270w] = pus[jxi270w] / 3.0e8;
	  wls[jxi270w] = pigt / wns[jxi270w];
	  evs[jxi270w] = pus[jxi270w] * evc;
	  fprintf(
	    output,
	    "%5d %13.4lE %13.4lE %13.4lE %13.4lE %13.4lE\n",
	    (jxi270w + 1),
	    pus[jxi270w],
	    wns[jxi270w],
	    wls[jxi270w],
	    evs[jxi270w],
	    xiv[jxi270w]
	  );
	}
	break;
      case 5: //eV vector definition
	vns[insn - 1] = "EVS";
	fprintf(output, "  JXI     EVS          WNS          WLS          PUS          XIV\n");
	for (int jxi290w = 0; jxi290w < nxi; jxi290w++) {
	  evs[jxi290w] = vss[jxi290w];
	  pus[jxi290w] = evs[jxi290w] / evc;
	  xiv[jxi290w] = pus[jxi290w] / wp;
	  wns[jxi290w] = pus[jxi290w] / 3.0e8;
	  wls[jxi290w] = pigt / wns[jxi290w];
	  fprintf(
	    output,
	    "%5d %13.4lE %13.4lE %13.4lE %13.4lE %13.4lE\n",
	    (jxi290w + 1),
	    evs[jxi290w],
	    wns[jxi290w],
	    wls[jxi290w],
	    pus[jxi290w],
	    xiv[jxi290w]
	  );
	}
	break;
      }
    } else { // The variable vector needs to be computed in steps
      double vs, vs_step;
      int vs_exp, vs_step_exp;
      sscanf(file_lines[++last_read_line].c_str(), " %lf D%d %lf D%d", &vs, &vs_exp, &vs_step, &vs_step_exp);
      vs *= pow(10.0, vs_exp);
      vs_step *= pow(10.0, vs_step_exp);
      switch (insn) {
      case 1: //xi vector definition
	vns[insn - 1] = "XIV";
	fprintf(output, "  JXI     XIV          WNS          WLS          PUS          EVS\n");
	for (int jxi110w = 0; jxi110w < nxi; jxi110w++) {
	  vss[jxi110w] = vs;
	  xiv[jxi110w] = vss[jxi110w];
	  pus[jxi110w] = xiv[jxi110w] * wp;
	  wns[jxi110w] = pus[jxi110w] / 3.0e8;
	  evs[jxi110w] = pus[jxi110w] * evc;
	  wls[jxi110w] = pigt / wns[jxi110w];
	  fprintf(
	    output,
	    "%5d %13.4lE %13.4lE %13.4lE %13.4lE %13.4lE\n",
	    (jxi110w + 1),
	    xiv[jxi110w],
	    wns[jxi110w],
	    wls[jxi110w],
	    pus[jxi110w],
	    evs[jxi110w]
	  );
	  vs += vs_step;
	}
	break;
      case 2: //wave number vector definition
	vns[insn - 1] = "WNS";
	fprintf(output, "  JXI     WNS          WLS          PUS          EVS          XIV\n");
	for (int jxi130w = 0; jxi130w < nxi; jxi130w++) {
	  vss[jxi130w] = vs;
	  wns[jxi130w] = vss[jxi130w];
	  xiv[jxi130w] = 3.0e8 * wns[jxi130w] / wp;
	  pus[jxi130w] = xiv[jxi130w] * wp;
	  wls[jxi130w] = pigt / wns[jxi130w];
	  evs[jxi130w] = pus[jxi130w] * evc;
	  fprintf(
	    output,
	    "%5d %13.4lE %13.4lE %13.4lE %13.4lE %13.4lE\n",
	    (jxi130w + 1),
	    wns[jxi130w],
	    wls[jxi130w],
	    pus[jxi130w],
	    evs[jxi130w],
	    xiv[jxi130w]
	  );
	  vs += vs_step;
	}
	break;
      case 3: //wavelength vector definition
	vns[insn - 1] = "WLS";
	fprintf(output, "  JXI     WLS          WNS          PUS          EVS          XIV\n");
	for (int jxi150w = 0; jxi150w < nxi; jxi150w++) {
	  vss[jxi150w] = vs;
	  wls[jxi150w] = vss[jxi150w];
	  wns[jxi150w] = pigt / wls[jxi150w];
	  xiv[jxi150w] = 3.0e8 * wns[jxi150w] / wp;
	  pus[jxi150w] = xiv[jxi150w] * wp;
	  evs[jxi150w] = pus[jxi150w] * evc;
	  fprintf(
	    output,
	    "%5d %13.4lE %13.4lE %13.4lE %13.4lE %13.4lE\n",
	    (jxi150w + 1),
	    wls[jxi150w],
	    wns[jxi150w],
	    pus[jxi150w],
	    evs[jxi150w],
	    xiv[jxi150w]
	  );
	  vs += vs_step;
	}
	break;
      case 4: //pu vector definition
	vns[insn - 1] = "PUS";
	fprintf(output, "  JXI     PUS          WNS          WLS          EVS          XIV\n");
	for (int jxi170w = 0; jxi170w < nxi; jxi170w++) {
	  vss[jxi170w] = vs;
	  pus[jxi170w] = vss[jxi170w];
	  xiv[jxi170w] = pus[jxi170w] / wp;
	  wns[jxi170w] = pus[jxi170w] / 3.0e8;
	  wls[jxi170w] = pigt / wns[jxi170w];
	  evs[jxi170w] = pus[jxi170w] * evc;
	  fprintf(
	    output,
	    "%5d %13.4lE %13.4lE %13.4lE %13.4lE %13.4lE\n",
	    (jxi170w + 1),
	    pus[jxi170w],
	    wns[jxi170w],
	    wls[jxi170w],
	    evs[jxi170w],
	    xiv[jxi170w]
	  );
	  vs += vs_step;
	}
	break;
      case 5: //eV vector definition
	vns[insn - 1] = "EVS";
	fprintf(output, "  JXI     EVS          WNS          WLS          PUS          XIV\n");
	for (int jxi190w = 0; jxi190w < nxi; jxi190w++) {
	  vss[jxi190w] = vs;
	  evs[jxi190w] = vss[jxi190w];
	  pus[jxi190w] = evs[jxi190w] / evc;
	  xiv[jxi190w] = pus[jxi190w] / wp;
	  wns[jxi190w] = pus[jxi190w] / 3.0e8;
	  wls[jxi190w] = pigt / wns[jxi190w];
	  fprintf(
	    output,
	    "%5d %13.4lE %13.4lE %13.4lE %13.4lE %13.4lE\n",
	    (jxi190w + 1),
	    evs[jxi190w],
	    wns[jxi190w],
	    wls[jxi190w],
	    pus[jxi190w],
	    xiv[jxi190w]
	  );
	  vs += vs_step;
	}
	break;
      }
    }
    // End of the untested code section.
  } else {
    if (instpc < 1) {
      // In this case the XI vector is explicitly defined.
      // Test input comes this way.
      double xi, pu, wn;
      int xi_exp;
      vns[insn - 1] = "XIV";
      List<double> xi_vector;
      sscanf(file_lines[++last_read_line].c_str(), " %9lE D%d", &xi, &xi_exp);
      xi *= pow(10.0, xi_exp);
      xi_vector.set(0, xi);
      for (int jxi310 = 1; jxi310 < nxi; jxi310++) {
	sscanf(file_lines[++last_read_line].c_str(), " %9lE D%d", &xi, &xi_exp);
	xi *= pow(10.0, xi_exp);
	xi_vector.append(xi);
      }
      vss = xi_vector.to_array();
      xiv = xi_vector.to_array();
      pu = xip + wp;
      wn = pu / 3.0e8;
      fprintf(output, "          XIP          WN           WL           PU           EV\n");
      fprintf(output, "     %13.4lE", xip);
      fprintf(output, "%13.4lE", wn);
      fprintf(output, "%13.4lE", pigt / wn);
      fprintf(output, "%13.4lE", pu);
      fprintf(output, "%13.4lE\n", pu * evc);
      fprintf(output, "  SCALE FACTORS XI\n", pu * evc);
      for (int jxi6612 = 1; jxi6612 <= nxi; jxi6612++)
	fprintf(output, "%5d%13.4lE\n", jxi6612, xiv[jxi6612 - 1]);
      //INXI branch ends here.
    }
  }
  last_read_line++;
  iog = new int[nsph];
  for (int i = 0; i < nsph; i++) {
    sscanf(file_lines[last_read_line].c_str(), " %d", (iog + i));
  }
  nshl = new int[nsph];
  ros = new double[nsph];
  rcf = new double*[nsph];
  for (int i113 = 1; i113 <= nsph; i113++) {
    int i_val;
    double ros_val;
    int ros_val_exp;
    if (iog[i113 - 1] < i113) continue;
    sscanf(file_lines[++last_read_line].c_str(), " %d %9lf D%d", &i_val, &ros_val, &ros_val_exp);
    nshl[i113 - 1] = i_val;
    ros[i113 - 1] = ros_val * pow(10.0, ros_val_exp);
    nsh = nshl[i113 -1];
    if (i113 == 1) nsh += ies;
    if ((nsh + 1) / 2 + ies > max_nsh) max_nsh = (nsh + 1) / 2 + ies;
    rcf[i113 - 1] = new double[nsh];
    for (int ns = 0; ns < nsh; ns++) {
      double ns_rcf;
      int ns_rcf_exp;
      sscanf(file_lines[++last_read_line].c_str(), " %8lf D%d", &ns_rcf, &ns_rcf_exp);
      rcf[i113 -1][ns] = ns_rcf * pow(10.0, ns_rcf_exp);
    }
  }
  // The FORTRAN code writes an auxiliary file in binary format. This should
  // be avoided or possibly replaced with the use of standard file formats for
  // scientific use (e.g. FITS).
  ofstream tedf_file;
  tedf_file.open("c_TEDF", ofstream::binary);
  tedf_file.write(reinterpret_cast<char *>(&nsph), sizeof(nsph));
  for (int iogi = 0; iogi < nsph; iogi++)
    tedf_file.write(reinterpret_cast<char *>(iog + iogi), sizeof(iog[iogi]));
  tedf_file.write(reinterpret_cast<char *>(&exdc), sizeof(exdc));
  tedf_file.write(reinterpret_cast<char *>(&wp), sizeof(wp));
  tedf_file.write(reinterpret_cast<char *>(&xip), sizeof(xip));
  tedf_file.write(reinterpret_cast<char *>(&idfc), sizeof(idfc));
  tedf_file.write(reinterpret_cast<char *>(&nxi), sizeof(nxi));
  for (int i115 = 1; i115 <= nsph; i115++) {
    if (iog[i115 - 1] < i115) continue;
    tedf_file.write(reinterpret_cast<char *>(nshl + i115 - 1), sizeof(nshl[i115 - 1]));
    tedf_file.write(reinterpret_cast<char *>(ros + i115 - 1), sizeof(ros[i115 - 1]));
    nsh = nshl[i115 - 1];
    if (i115 == 1) nsh += ies;
    for (int ins = 0; ins < nsh; ins++)
      tedf_file.write(reinterpret_cast<char *>(rcf[i115 - 1] + ins), sizeof(rcf[i115 - 1][ins]));
  }
  // Remake the dc0m matrix.
  dc0m = new complex<double>**[max_nsh];
  for (int dim1 = 0; dim1 < max_nsh; dim1++) {
    dc0m[dim1] = new complex<double>*[nsph];
    for (int dim2 = 0; dim2 < nxi; dim2++) {
      dc0m[dim1][dim2] = new complex<double>[nxi];
    }
  }
  for (int jxi468 = 1; jxi468 <= nxi; jxi468++) {
    if (idfc != 0 && jxi468 > 1) continue;
    for (int i162 = 1; i162 <= nsph; i162++) {
      if (iog[i162 - 1] < i162) continue;
      nsh = nshl[i162 - 1];
      ici = (nsh + 1) / 2; // QUESTION: is integer division really intended here?
      if (i162 == 1) ici = ici + ies;
      for (int i157 = 0; i157 < ici; i157++) {
	double dc0_real, dc0_img;
	int dc0_real_exp, dc0_img_exp;
	sscanf(file_lines[++last_read_line].c_str(), " (%8lf D%d, %8lf D%d)", &dc0_real, &dc0_real_exp, &dc0_img, &dc0_img_exp);
	dc0_real *= pow(10.0, dc0_real_exp);
	dc0_img *= pow(10.0, dc0_img_exp);
	dc0m[i157][i162 - 1][jxi468 - 1] = dc0_real + 1i * dc0_img;
	// The FORTRAN code writes the complex numbers as a 16-byte long binary stream.
	// Here we assume that the 16 bytes are equally split in 8 bytes to represent the
	// real part and 8 bytes to represent the imaginary one.
	tedf_file.write(reinterpret_cast<char *>(&dc0_real), sizeof(dc0_real));
	tedf_file.write(reinterpret_cast<char *>(&dc0_img), sizeof(dc0_img));
      }
    }
  }
  tedf_file.close();
  if (idfc != 0) {
    fprintf(output, "  DIELECTRIC CONSTANTS\n");
    for (int i473 = 1; i473 <= nsph; i473++) {
      if (iog[i473 - 1] != i473) continue;
      ici = (nshl[i473 - 1] + 1) / 2;
      if (i473 == 1) ici += ies;
      fprintf(output, " SPHERE N. %4d\n", i473);
      for (int ic472 = 0; ic472 < ici; ic472++) {
	double dc0_real = dc0m[ic472][i473 - 1][0].real(), dc0_img = dc0m[ic472][i473 - 1][0].imag();
	fprintf(output, "%5d %12.4lE%12.4lE\n", (ic472 + 1), dc0_real, dc0_img);
      }
    }
  } else {
    fprintf(output, "  DIELECTRIC FUNCTIONS\n");
    for (int i478 = 1; i478 <= nsph; i478++) {
      if (iog[i478 - 1] != i478) continue;
      ici = (nshl[i478 - 1] + 1) / 2;
      if (i478 == 1) ici += ies;
      fprintf(output, " SPHERE N. %4d\n", i478);
      for (int ic477 = 1; ic477 <= ici; ic477++) {
	fprintf(output, " NONTRANSITION LAYER N. %2d , SCALE =  %3c\n", ic477, vns[insn - 1].c_str());
	for (int jxi476 = 0; jxi476 < nxi; jxi476++) {
	  double dc0_real = dc0m[ic477 - 1][i478 - 1][jxi476].real();
	  double dc0_img = dc0m[ic477 - 1][i478 - 1][jxi476].imag();
	  fprintf(output, "%5d (%12.4lE,%12.4lE)\n", (jxi476 + 1), dc0_real, dc0_img);
	}
      }
    }
  }
  fclose(output);
  return 0;
}

string *load_file(string file_name, int *count = 0) {
  fstream input_file(file_name.c_str(), ios::in);
  List<string> file_lines = List<string>();
  string line;
  if (input_file.is_open()) {
    getline(input_file, line);
    file_lines.set(0, line);
    while (getline(input_file, line)) {
      file_lines.append(line);
    }
    input_file.close();
  }
  string *array_lines = file_lines.to_array();
  if (count != 0) *count = file_lines.length();
  return array_lines;
}