Commit 485afdf9 authored by Giovanni La Mura's avatar Giovanni La Mura
Browse files

Add test case for parallel SPHERE

parent 3ce1423c

.gitlab-ci.yml

+15 −6
Original line number Diff line number Diff line
@@ -236,19 +236,25 @@ running_stage: 
      - cd build/libnptm

      - export LD_LIBRARY_PATH="$LD_LIBRARY_PATH;$PWD"

      - cd ../sphere

      - echo "Testing configurator for sphere"

      - echo "Testing configurator for SPHERE"

      - ../../src/scripts/model_maker.py ../../test_data/sphere/config_dev.yml

      - echo "Running np_sphere"

      - chmod +x np_sphere

      - OMP_NUM_THREADS=1 ./np_sphere DEDFB DSPH .

      - mv c_OSPH c_OSPH_dev

      - echo "Testing parallel execution of SPHERE"

      - ../../src/scripts/model_maker.py ../../test_data/sphere/config_181_xi.yml

      - echo "Running parallel np_sphere"

      - OMP_NUM_THREADS=2 ./np_sphere DEDFB_181_xi DSPH_181_xi .

      - mv c_OSPH c_OSPH_181_xi

      - cd ../cluster

      - echo "Testing configurator for cluster"

      - echo "Testing configurator for CLUSTER"

      - ../../src/scripts/model_maker.py ../../test_data/cluster/config_dev.yml

      - echo "Running np_cluster"

      - chmod +x np_cluster

      - OMP_NUM_THREADS=1 ./np_cluster DEDFB DCLU .

      - cd ../inclusion

      - echo "Testing configurator for inclusion"

      - echo "Testing configurator for INCLUSION"

      - ../../src/scripts/model_maker.py ../../test_data/inclusion/config_dev.yml

      - echo "Running np_inclusion"

      - chmod +x np_inclusion
@@ -282,9 +288,12 @@ testing_stage: 
      - cd build/libnptm

      - export LD_LIBRARY_PATH="$LD_LIBRARY_PATH;$PWD"

      - cd ../sphere

      - export FFILE=../../test_data/sphere/OSPH

      - echo "Comparing output of SPHERE"

      - python3 ../../src/scripts/pycompare.py --no-progress --ffile $FFILE --cfile c_OSPH --html

      - export FFILE=../../test_data/sphere/OSPH

      - python3 ../../src/scripts/pycompare.py --no-progress --ffile $FFILE --cfile c_OSPH_dev --html

      - echo "Comparing output of parallel SPHERE"

      - export FFILE=../../test_data/sphere/OSPH_181_xi

      - python3 ../../src/scripts/pycompare.py --no-progress --ffile $FFILE --cfile c_OSPH_181_xi --html

      - echo "Checking consistency among legacy and HDF5 configuration files"

      - ../testing/test_TEDF ../../test_data/sphere/DEDFB c_TEDF c_TEDF.hd5

      - cd ../inclusion
@@ -316,7 +325,7 @@ testing_stage: 
      - export FFILE=../../test_data/cluster/OCLU_24

      - python3 ../../src/scripts/pycompare.py --no-progress --ffile $FFILE --cfile c_OCLU_24

      - rm -rf c_OCLU_24

      - echo "Checking consistency of HDF5 incluson output"

      - echo "Checking consistency of HDF5 inclusion output"

      - chmod u+x test_inclusion_outputs

      - ./test_inclusion_outputs

      - export FFILE=../../test_data/inclusion/OINCLU

test_data/sphere/OSPH_181_xi

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test_data/sphere/config_181_xi.yml

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system_settings:

  # Limit on host RAM use in Gb (0 for no configuration limit)

  max_host_ram : 0

  # Limit on GPU RAM use in Gb ( 0 for no configuration limit)

  max_gpu_ram  : 0



input_settings:

  # Folder to write the code input configuration files

  input_folder : "."

  # Name of the scatterer description file

  spheres_file : "DEDFB_181_xi"

  # Name of the geometry description file

  geometry_file: "DSPH_181_xi"

  

output_settings:

  # Folder for the code output storage

  output_folder: "."

  # Name of the main output file

  output_name  : "c_OSPH"

  # Requested output formats

  formats      : [ "LEGACY", "HDF5" ]

  # Index of the scale for transition matrix output

  jwtm         : 1



particle_settings:

  # What application to use (SPHERE | CLUSTER | INCLUSION)

  application : "SPHERE"

  # Number of spheres

  n_spheres   : 1

  # Number of sphere types

  n_types     : 1

  # Vector of sphere type identifiers (what type is each sphere)

  sph_types   : [ 1 ]

  # Vector of layers in types (how many layers in each type)

  n_layers    : [ 2 ]

  # Spherical monomer radii in m (one size for each type)

  radii       : [ 9.085603e-8 ]

  # Layer fractional radii (one per layer in each type)

  rad_frac    : [ [ 0.5, 1.0 ] ]

  # Index of the dielectric constants (one per layer in each type)

  #

  # 1 is first file in `dielec_file`, 2 is second ...

  dielec_id   : [ [ 1, 2 ] ]



material_settings:

  diel_flag   : 0

  # External medium dielectric constant

  extern_diel : 1.00e+00

  # Dielectric constant files folder

  dielec_path : "../../ref_data"

  # List of dielectric constant files (used if diel_flag = 0)

  dielec_file : [ "eps_draine_Si.csv", "eps_ashok_C.csv" ]

  # Dielectric constant files format (same for all files)

  dielec_fmt  : [ "CSV" ]

  # Matching method between optical constants and radiation wavelengths

  #

  # INTERPOLATE: the constants are interpolated on wavelengths

  # GRID: only the wavelengths with defined constants are computed

  #

  match_mode  : "INTERPOLATE"

  # Reference dielectric constants (used if diel_flag = -1)

  #

  # One real and one imaginary part for each layer in each type.

  diel_const  : [ ]



radiation_settings:

  # Radiation field polarization (LINEAR | CIRCULAR)

  polarization: "LINEAR"

  # First scale to be used

  scale_start : 1.00e-07

  # Last scale to be used

  scale_end   : 1.00e-06

  # Calculation step (overridden if `match_mode` is GRID)

  scale_step  : 5.00e-09

  # Peak Omega

  wp          : 3.00e+08

  # Peak scale

  xip         : 1.00e+00

  # Define scale explicitly (0) or in equal steps (1)

  step_flag   : 0

  # Type of scaling variable

  scale_name  : "WAVELENGTH"



geometry_settings:

  # Maximum internal field expansion

  li          : 4

  # Maximum external field expansion (not used by SPHERE)

  le          : 8

  # Number of transition layer integration points

  npnt        : 149

  # Number of non transition layer integration points

  npntts      : 300

  # Averaging mode

  iavm        : 0

  # Meridional plane flag

  isam        : 0

  # Starting incidence azimuth angle

  in_th_start : 0.0

  # Incidence azimuth angle incremental step

  in_th_step  : 0.0

  # Ending incidence azimuth angle

  in_th_end   : 0.0

  # Starting incidence elevation angle

  in_ph_start : 0.0

  # Incidence elevation angle incremental step

  in_ph_step  : 0.0

  # Ending incidence elevation angle

  in_ph_end   : 0.0

  # Starting scattered azimuth angle

  sc_th_start : 0.0

  # Scattered azimuth angle incremental step

  sc_th_step  : 0.0

  # Ending scattered azimuth angle

  sc_th_end   : 0.0

  # Starting scattered elevation angle

  sc_ph_start : 0.0

  # Scattered elevation angle incremental step

  sc_ph_step  : 0.0

  # Ending scattered elevation angle

  sc_ph_end   : 0.0

  # Vector of sphere X coordinates (one per sphere or empty for random)

  x_coords    : [ ]

  # Vector of sphere Y coordinates (one per sphere or empty for random)

  y_coords    : [ ]

  # Vector of sphere Z coordinates (one per sphere or empty for random)

  z_coords    : [ ]