Commit 45495e78 authored by Giovanni La Mura's avatar Giovanni La Mura
Browse files

Merge branch 'master' into virtualize_output enabling parallel calculation... 

Merge branch 'master' into virtualize_output enabling parallel calculation sorting and result flushing
parents 9e49e770 0a8a1bce

src/cluster/cluster.cpp

+5 −5
Original line number Diff line number Diff line
@@ -562,7 +562,7 @@ void cluster(const string& config_file, const string& data_file, const string& o 
      ClusterIterationData *cid_2 = NULL;

      VirtualAsciiFile *p_output_2 = NULL;

      VirtualBinaryFile *vtppoanp_2 = NULL;

      // fstream *tppoanp_2 = NULL;

      // PLACEHOLDER

      // for threads other than the 0, create distinct copies of all relevant data, while for thread 0 just define new references / pointers to the original ones

      if (myompthread == 0) {

	cid_2 = cid;
@@ -621,7 +621,7 @@ void cluster(const string& config_file, const string& data_file, const string& o 
      }

      delete cid_2;



    }

    } // close pragma omp parallel

    delete p_scattering_angles;

    delete sconf;

    delete gconf;

src/scripts/pycompare.py

+4 −2
Original line number Diff line number Diff line
@@ -171,15 +171,17 @@ def compare_files(config): 
            if (c_lines[0].startswith("INSERTION:")):

                c_lines = [c_file.readline()]

                num_read_lines += 1

            num_read_lines += 1

        # Start here the comparison loop

        if (len(f_lines) == len(c_lines)):

            for li in range(len(f_lines)):

                line_result = compare_lines(f_lines[li], c_lines[li], config, li + 1, num_len, l_file)

                line_result = compare_lines(f_lines[li], c_lines[li], config, num_read_lines, num_len, l_file)

                mismatch_count['errors'] += line_result[0]

                mismatch_count['warnings'] += line_result[1]

                mismatch_count['noisy'] += line_result[2]

                if (mismatch_count['errors'] > 0 and not config['check_all']):

                    print("INFO: mismatch found at line %d"%(li + 1))

                    print("INFO: mismatch found at line %d"%(num_read_lines))

                    line_loop = False

                    break

        else:

            mismatch_count['errors'] = len(c_lines)

test_data/cluster/case_3/DEDFB_33

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