Loading src/include/tfrfme.h +1 −9 Original line number Diff line number Diff line Loading @@ -132,8 +132,6 @@ protected: int _last_matrix; //! Number of beam description wave numbers. int _nkv; //! Contiguous vector of VKZM matrix. double *vec_vkzm; //! QUESTION: definition? double _apfafa; //! QUESTION: definition? Loading Loading @@ -197,7 +195,7 @@ public: //! QUESTION: definition? double *vkv; //! QUESTION: definition? double **vkzm; double *vec_vkzm; //! QUESTION: definition? const double &apfafa = _apfafa; //! QUESTION: definition? Loading Loading @@ -244,12 +242,6 @@ public: */ static Swap2* from_binary(const std::string& file_name, const std::string& mode="LEGACY"); /*! \brief Get the pointer to the VKZM matrix. * * \return value: `double **` Pointer to the VKZM matrix. */ double **get_matrix() { return vkzm; } /*! \brief Calculate the necessary amount of memory to create a new instance. * * \param nkv: `int` Number of beam description wave numbers. Loading src/libnptm/tfrfme.cpp +7 −9 Original line number Diff line number Diff line Loading @@ -222,8 +222,6 @@ Swap2::Swap2(int nkv) { _nkv = nkv; vkv = new double[_nkv](); vec_vkzm = new double[_nkv * _nkv](); vkzm = new double*[nkv]; for (int vi = 0; vi < _nkv; vi++) vkzm[vi] = vec_vkzm + vi * _nkv; _last_vector = 0; _last_matrix = 0; } Loading @@ -231,7 +229,6 @@ Swap2::Swap2(int nkv) { Swap2::~Swap2() { delete[] vkv; delete[] vec_vkzm; delete[] vkzm; } Swap2* Swap2::from_binary(const std::string& file_name, const std::string& mode) { Loading Loading @@ -298,14 +295,14 @@ Swap2* Swap2::from_legacy(const std::string& file_name) { fstream input; Swap2 *instance = NULL; int fnkv, fnlmmt, fnrvc; double **fvkzm = NULL; double *fvkzm = NULL; double *fvkv = NULL; double value; input.open(file_name.c_str(), ios::in | ios::binary); if (input.is_open()) { input.read(reinterpret_cast<char *>(&fnkv), sizeof(int)); instance = new Swap2(fnkv); fvkzm = instance->get_matrix(); fvkzm = instance->vec_vkzm; fvkv = instance->get_vector(); for (int vj = 0; vj < fnkv; vj++) { input.read(reinterpret_cast<char *>(&value), sizeof(double)); Loading @@ -314,7 +311,7 @@ Swap2* Swap2::from_legacy(const std::string& file_name) { for (int mi = 0; mi < fnkv; mi++) { for (int mj = 0; mj < fnkv; mj++) { input.read(reinterpret_cast<char *>(&value), sizeof(double)); fvkzm[mi][mj] = value; fvkzm[fnkv * mi + mj] = value; } } input.read(reinterpret_cast<char *>(&value), sizeof(double)); Loading Loading @@ -359,7 +356,7 @@ long Swap2::get_size(int nkv) { void Swap2::push_matrix(double value) { int col = _last_matrix % (_nkv - 1); int row = _last_matrix - (_nkv * row); vkzm[row][col] = value; vec_vkzm[nkv * row + col] = value; _last_matrix++; } Loading Loading @@ -480,7 +477,7 @@ void Swap2::write_legacy(const std::string& file_name) { } for (int mi = 0; mi < _nkv; mi++) { for (int mj = 0; mj < _nkv; mj++) { value = vkzm[mi][mj]; value = vec_vkzm[nkv * mi + mj]; output.write(reinterpret_cast<const char*>(&value), sizeof(double)); } } Loading Loading @@ -552,8 +549,9 @@ bool Swap2::operator ==(Swap2 &other) { } } for (int mi = 0; mi < _nkv; mi++) { int nkvi = nkv * mi; for (int mj = 0; mj < _nkv; mj++) { if (vkzm[mi][mj] != other.vkzm[mi][mj]) { if (vec_vkzm[nkvi + mj] != other.vec_vkzm[nkvi + mj]) { return false; } } Loading src/libnptm/tra_subs.cpp +3 −3 Original line number Diff line number Diff line Loading @@ -273,7 +273,7 @@ dcomplex *frfmer( const dcomplex cc0 = 0.0 + 0.0 * I; double sq = vkm * vkm; double *_vkv = tt2->get_vector(); double **_vkzm = tt2->get_matrix(); double *vec_vkzm = tt2->vec_vkzm; dcomplex *wk = new dcomplex[nlemt](); for (int jy90 = 0; jy90 < nkv; jy90++) { double vky = _vkv[jy90]; Loading @@ -287,10 +287,10 @@ dcomplex *frfmer( double vkz = sqrt(sq - sqn); wamff(wk, vkx, vky, vkz, le, apfafa, tra, spd, rir, ftcn, lmode, pmf); for (int j = 0; j < nlemt; j++) tt1->append(wk[j]); _vkzm[jx80][jy90] = vkz; vec_vkzm[nkv * jx80 + jy90] = vkz; } else { // label 50 for (int j = 0; j < nlemt; j++) tt1->append(cc0); _vkzm[jx80][jy90] = 0.0; vec_vkzm[nkv * jx80 + jy90] = 0.0; } } // jx80 loop } // jy90 loop Loading src/trapping/cfrfme.cpp +1 −4 Original line number Diff line number Diff line Loading @@ -151,7 +151,6 @@ void frfme(string data_file, string output_path) { double apfafa = 0.0, pmf = 0.0, spd = 0.0, rir = 0.0, ftcn = 0.0, fshmx = 0.0; double vxyzmx = 0.0, delxyz = 0.0, vknmx = 0.0, delk = 0.0, delks = 0.0; double frsh = 0.0, exril = 0.0; double **vkzm = NULL; double *vkv = NULL; int nlmmt = 0, nrvc = 0; // Vector size variables Loading Loading @@ -183,7 +182,6 @@ void frfme(string data_file, string output_path) { if (tt2 == NULL) tt2 = Swap2::from_binary(tempname2, "HDF5"); if (tt2 != NULL) { vkv = tt2->get_vector(); vkzm = tt2->get_matrix(); apfafa = tt2->apfafa; pmf = tt2->pmf; spd = tt2->spd; Loading Loading @@ -353,7 +351,6 @@ void frfme(string data_file, string output_path) { logger.log(message); tt2 = new Swap2(nkv); vkv = tt2->get_vector(); vkzm = tt2->get_matrix(); // End of array initialization double vkm = vk * exri; vknmx = vk * an; Loading Loading @@ -465,7 +462,7 @@ void frfme(string data_file, string output_path) { int size_vec_tt1_wk = nkvs * nlmmt; const dcomplex *vec_tt1_wk = tt1->wk; dcomplex *vec_wsum = tfrfme->wsum[0]; double *vec_vkzm = vkzm[0]; double *vec_vkzm = tt2->vec_vkzm; dcomplex *global_vec_w = new dcomplex[size_global_vec_w](); message = "INFO: looping over " + to_string(jlml - jlmf + 1) + " J iterations.\n"; logger.log(message); Loading Loading
src/include/tfrfme.h +1 −9 Original line number Diff line number Diff line Loading @@ -132,8 +132,6 @@ protected: int _last_matrix; //! Number of beam description wave numbers. int _nkv; //! Contiguous vector of VKZM matrix. double *vec_vkzm; //! QUESTION: definition? double _apfafa; //! QUESTION: definition? Loading Loading @@ -197,7 +195,7 @@ public: //! QUESTION: definition? double *vkv; //! QUESTION: definition? double **vkzm; double *vec_vkzm; //! QUESTION: definition? const double &apfafa = _apfafa; //! QUESTION: definition? Loading Loading @@ -244,12 +242,6 @@ public: */ static Swap2* from_binary(const std::string& file_name, const std::string& mode="LEGACY"); /*! \brief Get the pointer to the VKZM matrix. * * \return value: `double **` Pointer to the VKZM matrix. */ double **get_matrix() { return vkzm; } /*! \brief Calculate the necessary amount of memory to create a new instance. * * \param nkv: `int` Number of beam description wave numbers. Loading
src/libnptm/tfrfme.cpp +7 −9 Original line number Diff line number Diff line Loading @@ -222,8 +222,6 @@ Swap2::Swap2(int nkv) { _nkv = nkv; vkv = new double[_nkv](); vec_vkzm = new double[_nkv * _nkv](); vkzm = new double*[nkv]; for (int vi = 0; vi < _nkv; vi++) vkzm[vi] = vec_vkzm + vi * _nkv; _last_vector = 0; _last_matrix = 0; } Loading @@ -231,7 +229,6 @@ Swap2::Swap2(int nkv) { Swap2::~Swap2() { delete[] vkv; delete[] vec_vkzm; delete[] vkzm; } Swap2* Swap2::from_binary(const std::string& file_name, const std::string& mode) { Loading Loading @@ -298,14 +295,14 @@ Swap2* Swap2::from_legacy(const std::string& file_name) { fstream input; Swap2 *instance = NULL; int fnkv, fnlmmt, fnrvc; double **fvkzm = NULL; double *fvkzm = NULL; double *fvkv = NULL; double value; input.open(file_name.c_str(), ios::in | ios::binary); if (input.is_open()) { input.read(reinterpret_cast<char *>(&fnkv), sizeof(int)); instance = new Swap2(fnkv); fvkzm = instance->get_matrix(); fvkzm = instance->vec_vkzm; fvkv = instance->get_vector(); for (int vj = 0; vj < fnkv; vj++) { input.read(reinterpret_cast<char *>(&value), sizeof(double)); Loading @@ -314,7 +311,7 @@ Swap2* Swap2::from_legacy(const std::string& file_name) { for (int mi = 0; mi < fnkv; mi++) { for (int mj = 0; mj < fnkv; mj++) { input.read(reinterpret_cast<char *>(&value), sizeof(double)); fvkzm[mi][mj] = value; fvkzm[fnkv * mi + mj] = value; } } input.read(reinterpret_cast<char *>(&value), sizeof(double)); Loading Loading @@ -359,7 +356,7 @@ long Swap2::get_size(int nkv) { void Swap2::push_matrix(double value) { int col = _last_matrix % (_nkv - 1); int row = _last_matrix - (_nkv * row); vkzm[row][col] = value; vec_vkzm[nkv * row + col] = value; _last_matrix++; } Loading Loading @@ -480,7 +477,7 @@ void Swap2::write_legacy(const std::string& file_name) { } for (int mi = 0; mi < _nkv; mi++) { for (int mj = 0; mj < _nkv; mj++) { value = vkzm[mi][mj]; value = vec_vkzm[nkv * mi + mj]; output.write(reinterpret_cast<const char*>(&value), sizeof(double)); } } Loading Loading @@ -552,8 +549,9 @@ bool Swap2::operator ==(Swap2 &other) { } } for (int mi = 0; mi < _nkv; mi++) { int nkvi = nkv * mi; for (int mj = 0; mj < _nkv; mj++) { if (vkzm[mi][mj] != other.vkzm[mi][mj]) { if (vec_vkzm[nkvi + mj] != other.vec_vkzm[nkvi + mj]) { return false; } } Loading
src/libnptm/tra_subs.cpp +3 −3 Original line number Diff line number Diff line Loading @@ -273,7 +273,7 @@ dcomplex *frfmer( const dcomplex cc0 = 0.0 + 0.0 * I; double sq = vkm * vkm; double *_vkv = tt2->get_vector(); double **_vkzm = tt2->get_matrix(); double *vec_vkzm = tt2->vec_vkzm; dcomplex *wk = new dcomplex[nlemt](); for (int jy90 = 0; jy90 < nkv; jy90++) { double vky = _vkv[jy90]; Loading @@ -287,10 +287,10 @@ dcomplex *frfmer( double vkz = sqrt(sq - sqn); wamff(wk, vkx, vky, vkz, le, apfafa, tra, spd, rir, ftcn, lmode, pmf); for (int j = 0; j < nlemt; j++) tt1->append(wk[j]); _vkzm[jx80][jy90] = vkz; vec_vkzm[nkv * jx80 + jy90] = vkz; } else { // label 50 for (int j = 0; j < nlemt; j++) tt1->append(cc0); _vkzm[jx80][jy90] = 0.0; vec_vkzm[nkv * jx80 + jy90] = 0.0; } } // jx80 loop } // jy90 loop Loading
src/trapping/cfrfme.cpp +1 −4 Original line number Diff line number Diff line Loading @@ -151,7 +151,6 @@ void frfme(string data_file, string output_path) { double apfafa = 0.0, pmf = 0.0, spd = 0.0, rir = 0.0, ftcn = 0.0, fshmx = 0.0; double vxyzmx = 0.0, delxyz = 0.0, vknmx = 0.0, delk = 0.0, delks = 0.0; double frsh = 0.0, exril = 0.0; double **vkzm = NULL; double *vkv = NULL; int nlmmt = 0, nrvc = 0; // Vector size variables Loading Loading @@ -183,7 +182,6 @@ void frfme(string data_file, string output_path) { if (tt2 == NULL) tt2 = Swap2::from_binary(tempname2, "HDF5"); if (tt2 != NULL) { vkv = tt2->get_vector(); vkzm = tt2->get_matrix(); apfafa = tt2->apfafa; pmf = tt2->pmf; spd = tt2->spd; Loading Loading @@ -353,7 +351,6 @@ void frfme(string data_file, string output_path) { logger.log(message); tt2 = new Swap2(nkv); vkv = tt2->get_vector(); vkzm = tt2->get_matrix(); // End of array initialization double vkm = vk * exri; vknmx = vk * an; Loading Loading @@ -465,7 +462,7 @@ void frfme(string data_file, string output_path) { int size_vec_tt1_wk = nkvs * nlmmt; const dcomplex *vec_tt1_wk = tt1->wk; dcomplex *vec_wsum = tfrfme->wsum[0]; double *vec_vkzm = vkzm[0]; double *vec_vkzm = tt2->vec_vkzm; dcomplex *global_vec_w = new dcomplex[size_global_vec_w](); message = "INFO: looping over " + to_string(jlml - jlmf + 1) + " J iterations.\n"; logger.log(message); Loading