Minor fixes.

#!/bin/bash

if [ ! -f "Docker/Dockerfile" ]; then

    # TODO: This check is weak: improve me!

    echo "Please run this script from the project root folder"

    exit 1

fi

# Move to the root directory to allow accessing the code in Docker build context

OR_DIR=$PWD

cd Docker

# Are we on a Git repo?

#echo ""

#git status &> /dev/null

#if [[ "x$?" == "x0" ]] ; then

#    CHANGES=$(git status | grep "Changes not staged for commit") 

#    if [[ "x$CHANGES" == "x" ]] ; then

#        TAG=$(git rev-parse HEAD | cut -c1-7)

#        echo "I will tag this container with the Git short hash \"$TAG\" "

#    else

#        TAG="latest"

#        echo "You have uncomitted changes, I will not tag this container with the Git short hash. "

#    fi

#else

#    TAG="latest"

#fi

#echo ""

# Use --no-cache in case of build problems (i.e. 404 not found)

docker build  . -t sarusso/metadesktop

cd $OR_DIR

docker build  . -t rosetta/metadesktop

#!/bin/bash

docker run -v$PWD/:/data -p5900:5900 -p8590:8590 -it sarusso/metadesktop

docker run -v$PWD/:/data -p5900:5900 -p8590:8590 -it rosetta/metadesktop

docker push localhost:5000/rosetta/metadesktop

# Run

rosetta/shell slurmclustermaster-main "SINGULARITY_NOHTTPS=true singularity run --writable-tmpfs --containall --cleanenv docker://dregistry:5000/rosetta/metadesktop"

rosetta/shell slurmclustermaster-main "SINGULARITY_NOHTTPS=true singularity run --pid --writable-tmpfs --containall --cleanenv docker://dregistry:5000/rosetta/metadesktop"

# Run variants/tests

# rosetta/shell slurmclustermaster-main "SINGULARITY_NOHTTPS=true singularity run docker://dregistry:5000/rosetta/metadesktop"