Unverified Commit 99fb8d29 authored by Anton Hibl's avatar Anton Hibl Committed by GitHub
Browse files

Documentation fix for broken links in User Docs (#5182) 

* doc changes for new links, need to scan other files for the same

* fixed remaining links

* typo

* fixed command line references link for ISIS3 Applications
parent 4d051422

isis/src/docsys/build/TechnicalInfo.xsl

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@@ -176,7 +176,7 @@ Deborah Lee Soltesz 
        <tbody>

          <tr valign="top">

            <th style="width:25%">

              <a href="https://github.com/USGS-Astrogeology/ISIS3#installation">Installing ISIS</a>

              <a href="https://github.com/DOI-USGS/ISIS3#installation">Installing ISIS</a>

            </th>

            <td>

              Downloading and installing ISIS

isis/src/docsys/build/UserExplore.xsl

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@@ -128,13 +128,13 @@ Deborah Lee Soltesz 
          <td style="width:50%">

            <dl>

              <dt><h4>About ISIS Cubes</h4></dt>

              <dd><a href="https://usgs-astrogeology.github.io/ISIS3/ISIS_Cube_Format.html">

              <dd><a href="https://doi-usgs.github.io/ISIS3/ISIS_Cube_Format.html">

              ISIS Cube Format</a></dd>

              <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Understanding_Bit_Types">

              <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Understanding_Bit_Types">

              Understanding Bit Types</a></dd>

              <dd><a href="https://usgs-astrogeology.github.io/ISIS3/Core_Base_and_Multiplier.html">

              <dd><a href="https://doi-usgs.github.io/ISIS3/Core_Base_and_Multiplier.html">

              Core Base and Multipliers</a></dd>

              <dd><a href="https://usgs-astrogeology.github.io/ISIS3/Special_Pixels.html">

              <dd><a href="https://doi-usgs.github.io/ISIS3/Special_Pixels.html">

              Special Pixels</a></dd>

              <dd><a href="../documents/LabelDictionary/LabelDictionary.html">

              Label Dictionary</a></dd>
@@ -145,7 +145,7 @@ Deborah Lee Soltesz 
          <td style="width:50%">

            <dl>

              <dt><h4>About ISIS Applications</h4></dt>

              <dd><a href="https://usgs-astrogeology.github.io/ISIS3/ISIS_Cube_Format.html">

              <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Introduction_to_ISIS#Reserved-Command-Line-Arguments-">

              Command Line Reference</a></dd>

              <dd><a href="../documents/Glossary/Glossary.html">

              Glossary</a></dd>
@@ -214,15 +214,15 @@ Deborah Lee Soltesz 
          <td style="width:33%">

            <dl>

              <dt><h4>About Specific Applications</h4></dt>

              <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/General_Utility">

              <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/General_Utility">

              fx Guide</a></dd>

              <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Autoseed">

              <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Autoseed">

              autoseed Guide</a></dd>

              <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/SPICE">

              <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/SPICE">

              SPICE in ISIS</a></dd>

              <dd><a href="../documents/PatternMatch/PatternMatch.html">

              Pattern Matching Guide</a></dd>

              <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Automatic_Registration">

              <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Automatic_Registration">

              autoreg Guide</a></dd>

            </dl>

          </td>
@@ -230,13 +230,13 @@ Deborah Lee Soltesz 
          <td style="width:33%">

            <dl>

              <dt><h4>About Specialized Methods</h4></dt>

              <dd><a href="https://raw.githubusercontent.com/wiki/USGS-Astrogeology/ISIS3/attachments/download/971/IsisDemoIntro.pdf">

              <dd><a href="https://raw.githubusercontent.com/wiki/DOI-USGS/ISIS3/attachments/download/971/IsisDemoIntro.pdf">

              Photogrammetry in ISIS</a></dd>

              <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Image_Registration">

              <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Image_Registration">

              Image Registration</a></dd>

              <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Multi-Instrument_Registration">

              <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Multi-Instrument_Registration">

              Multi-Instrument Registration</a></dd>

              <dd><a href="https://raw.githubusercontent.com/wiki/USGS-Astrogeology/ISIS3/attachments/download/973/Jigsaw.pdf">

              <dd><a href="https://raw.githubusercontent.com/wiki/DOI-USGS/ISIS3/attachments/download/973/Jigsaw.pdf">

              Jigsaw Overview</a></dd>

            </dl>

          </td>
@@ -265,7 +265,7 @@ Deborah Lee Soltesz 
        <!-- hardcoded links -->

        <tr valign="top">

          <th style="width:25%">

            <a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Release-Schedule">

            <a href="https://github.com/DOI-USGS/ISIS3/wiki/Release-Schedule">

            Release Schedule</a>

          </th>

          <td>
@@ -285,7 +285,7 @@ Deborah Lee Soltesz 


        <tr valign="top">

          <th style="width:25%">

            <a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Deprecation">

            <a href="https://github.com/DOI-USGS/ISIS3/wiki/Deprecation">

            Deprecation Policy</a>

          </th>

          <td>

isis/src/docsys/build/UserInspire.xsl

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@@ -105,7 +105,7 @@ Deborah Lee Soltesz 
              </p>

              <p>

                If you have examples you would like to add to this page, submit a pull request on

                <a href="https://github.com/USGS-Astrogeology/ISIS3">GitHub</a>!

                <a href="https://github.com/DOI-USGS/ISIS3">GitHub</a>!

              </p>

            </td>

            <td align="right" class="caption">

isis/src/docsys/build/UserLearn.xsl

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@@ -164,10 +164,10 @@ Deborah Lee Soltesz 
            <td style="width:33%">

              <h4>General Image Processing Tutorials</h4>

              <p>

                <a href="https://usgs-astrogeology.github.io/ISIS3/The_Power_of_Spatial_Filters.html">

                <a href="https://doi-usgs.github.io/ISIS3/The_Power_of_Spatial_Filters.html">

                The Power of Spatial Filters</a><br/>

                A description of spatial filter applications in ISIS and common use cases.<br/>

                <a href="https://usgs-astrogeology.github.io/ISIS3/Removing_Striping_Noise_from_Image_Data.html">

                <a href="https://doi-usgs.github.io/ISIS3/Removing_Striping_Noise_from_Image_Data.html">

                Removing Striping Noise from Image Data</a><br/>

                Procedures for removing horizontal or vertical noise in an image.

              </p>
@@ -176,16 +176,16 @@ Deborah Lee Soltesz 
            <td style="width:33%">

              <h4>Interactive Tool Demos</h4>

              <p>

                <a href="https://raw.githubusercontent.com/wiki/USGS-Astrogeology/ISIS3/attachments/download/972/Qnet.pdf">

                <a href="https://raw.githubusercontent.com/wiki/DOI-USGS/ISIS3/attachments/download/972/Qnet.pdf">

                Qnet</a><br/>

                An interactive tool to create and edit control networks.<br/>

                <a href="https://raw.githubusercontent.com/wiki/USGS-Astrogeology/ISIS3/attachments/download/974/Qtie.pdf">

                <a href="https://raw.githubusercontent.com/wiki/DOI-USGS/ISIS3/attachments/download/974/Qtie.pdf">

                Qtie</a><br/>

                An interactive tool to update the camera geometry of a single cube.<br/>

                <a href="https://raw.githubusercontent.com/wiki/USGS-Astrogeology/ISIS3/attachments/download/975/Qview.pdf">

                <a href="https://raw.githubusercontent.com/wiki/DOI-USGS/ISIS3/attachments/download/975/Qview.pdf">

                Qview</a><br/>

                An interactive tool to display and analyze cubes.<br/>

                <a href="https://raw.githubusercontent.com/wiki/USGS-Astrogeology/ISIS3/attachments/download/976/Qmos.pdf">

                <a href="https://raw.githubusercontent.com/wiki/DOI-USGS/ISIS3/attachments/download/976/Qmos.pdf">

                Qmos</a><br/>

                An interactive tool to display and analyze cube footprints.

              </p>
@@ -194,10 +194,10 @@ Deborah Lee Soltesz 
            <td style="width:33%">

              <h4>Cartography Concepts</h4>

              <p>

                <a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Learning_About_Map_Projections">

                <a href="https://github.com/DOI-USGS/ISIS3/wiki/Learning_About_Map_Projections">

                Learning About Map Projection</a><br/>

                An introduction to map projections and utilizing them in ISIS.<br/>

                <a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Camera_Geometry">

                <a href="https://github.com/DOI-USGS/ISIS3/wiki/Camera_Geometry">

                Camera Geometry</a><br/>

                A description of camera geometry within ISIS and some of the ISIS applications that have access to it.

              </p>
@@ -248,7 +248,7 @@ Deborah Lee Soltesz 
            <h4>Moon</h4>

            <dl>

              <dt>Lunar Reconnaissance Orbiter</dt>

              <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Working_with_Lunar_Reconnaissance_Orbiter_MiniRF_Data">

              <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Working_with_Lunar_Reconnaissance_Orbiter_MiniRF_Data">

              MiniRF</a></dd>

            </dl>

          </td>
@@ -256,19 +256,19 @@ Deborah Lee Soltesz 
          <td style="width:33%">

            <h4>Mars</h4>

            <dl>

              <dt><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Working_with_Mars_Reconnaissance_Orbiter_(MRO)_Data">

              <dt><a href="https://github.com/DOI-USGS/ISIS3/wiki/Working_with_Mars_Reconnaissance_Orbiter_(MRO)_Data">

              Mars Reconnaissance Orbiter</a></dt>

                <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Working_with_Mars_Reconnaissance_Orbiter_HiRISE_Data">

                <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Working_with_Mars_Reconnaissance_Orbiter_HiRISE_Data">

                High Resolution Imaging Science Experiment (HiRise)</a></dd>

                <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Working_with_Mars_Reconnaissance_Orbiter_CTX_Data">

                <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Working_with_Mars_Reconnaissance_Orbiter_CTX_Data">

                Context Imager (CTX)</a></dd>

              <dt><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Mars_Global_Surveyor_Mission">

              <dt><a href="https://github.com/DOI-USGS/ISIS3/wiki/Mars_Global_Surveyor_Mission">

              Mars Global Surveyor</a></dt>

                <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Working_with_Mars_Orbiter_Camera_Data">

                <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Working_with_Mars_Orbiter_Camera_Data">

                Mars Orbiter Camera (MOC)</a></dd>

              <dt><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Viking_Orbiter_Mission">

              <dt><a href="https://github.com/DOI-USGS/ISIS3/wiki/Viking_Orbiter_Mission">

              Mars Viking Orbiter</a></dt>

                <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Working_with_Mars_Viking_Orbiter_Data">

                <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Working_with_Mars_Viking_Orbiter_Data">

                Narrow Angle Camera (NAC) and Wide Angle Camera (WAC)</a></dd>

            </dl>

          </td>
@@ -276,13 +276,13 @@ Deborah Lee Soltesz 
          <td style="width:33%">

            <h4>Other</h4>

            <dl>

              <dt><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/CSS">

              <dt><a href="https://github.com/DOI-USGS/ISIS3/wiki/CSS">

              Cassini-Huygens</a></dt>

                <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Working_with_Cassini_ISS_Data">

                <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Working_with_Cassini_ISS_Data">

                Imaging Science Subsystem (ISS)</a></dd>

                <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Working_with_Cassini_RADAR">

                <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Working_with_Cassini_RADAR">

                Radar</a></dd>

                <dd><a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Working_with_Cassini_VIMS">

                <dd><a href="https://github.com/DOI-USGS/ISIS3/wiki/Working_with_Cassini_VIMS">

                Visual and Infrared Mapping Spectrometer (VIMS)</a></dd>

            </dl>

          </td>

isis/src/docsys/build/UserStart.xsl

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@@ -128,7 +128,7 @@ Deborah Lee Soltesz 
        <!-- hardcoded links -->

        <tr valign="top">

          <th style="width:25%">

            <a href="https://github.com/USGS-Astrogeology/ISIS3#installation">

            <a href="https://github.com/DOI-USGS/ISIS3#installation">

            ISIS Installation Guide</a>

          </th>

          <td>
@@ -195,7 +195,7 @@ Deborah Lee Soltesz 
        <!-- hardcoded links -->

        <tr valign="top">

          <th style="width:25%">

            <a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Introduction_to_ISIS">

            <a href="https://github.com/DOI-USGS/ISIS3/wiki/Introduction_to_ISIS">

            Introduction to ISIS</a>

          </th>

          <td>
@@ -204,7 +204,7 @@ Deborah Lee Soltesz 
        </tr>

        <tr valign="top">

          <th style="width:25%">

            <a href="https://github.com/USGS-Astrogeology/ISIS3/wiki/Locating_and_Ingesting_Image_Data">

            <a href="https://github.com/DOI-USGS/ISIS3/wiki/Locating_and_Ingesting_Image_Data">

            Locating and Ingesting Image Data</a>

          </th>

          <td>
@@ -235,7 +235,7 @@ Deborah Lee Soltesz 
        <!-- hardcoded links -->

        <tr valign="top">

          <th style="width:25%">

            <a href="https://github.com/USGS-Astrogeology/ISIS3/blob/dev/Code-Of-Conduct.md">

            <a href="https://github.com/DOI-USGS/ISIS3/blob/dev/Code-Of-Conduct.md">

            Code of Conduct</a>

          </th>

          <td>
@@ -245,7 +245,7 @@ Deborah Lee Soltesz 
        </tr>

        <tr valign="top">

          <th style="width:25%">

            <a href="https://github.com/USGS-Astrogeology/ISIS3/issues">

            <a href="https://github.com/DOI-USGS/ISIS3/issues">

            Github Issues</a>

          </th>

          <td>