Updated preference files (#4354)

# Unignore all dirs

!*/

# Unignore Makefiles, and TestPreferences

# Unignore Makefiles, IsisPreferences, and TestPreferences

!Makefile

!TestPreferences

!IsisPreferences

!*/3rdParty/Makefile

# Unignore version file

#######################################################

# This file allows the user to customize their Isis

# configuration.  See the Isis Preference Dictionary

# on our website isis.astrogeology.usgs.gov for a

# full description of each group.

########################################################

########################################################

# Customize elements of the user interface

#

# ProgressBarPercent = 1 | 2 | 5 | 10

# ProgressBar = On | Off

# GuiStyle = windows | motif | cde | motifplus |

#            platinum | sgi | kde | aqua

# GuiHelpBrowser = { your preferred browser, may need path }

# GuiFontName = helvetica | times | charter | any legal font

# GuiFontSize = 10 | 12 | 14 | any font point size

# HistoryPath = { your preferred loaction for the application

#                 .par files }

# HistoryRecording = On | Off

# HistoryLength    = (your preferred count of history entries

#                      to remember)

########################################################

Group=UserInterface

  ProgressBarPercent = 10

  ProgressBar        = Off

  GuiHelpBrowser     = firefox

  GuiFontName        = helvetica

  GuiFontSize        = 10

  GuiWidth           = 460

  GuiHeight          = 600

  HistoryPath        = $HOME/.Isis/history

  HistoryRecording   = On

  HistoryLength      = 10

EndGroup

########################################################

# Customize how errors are reported

#

# FileLine = On | Off

# Format = Standard | Pvl

# StackTrace = On | Off

########################################################

Group = ErrorFacility

  FileLine = Off

  Format = Standard

  StackTrace = Off

EndGroup

########################################################

# Specify which ray-tracing engine to use for shape

# models.

#

# Leave the ShapeModel Group commented-out to continue

# using the ISIS default.

#

# RayTraceEngine = Bullet | Embree

# OnError = Continue | Fail

# Tolerance = { numerical value that will be set as the

#           tolerance for the Bullet or Embree shape

#           model }

#

########################################################

#Group = ShapeModel

#  RayTraceEngine = Embree

#  OnError = Continue

#  CubeSupported = False

#  Tolerance = DBL_MAX

#EndGroup

########################################################

# Customize how session logging is handled

#

# TerminalOutput = On | Off

#    On - in command-line mode - user input parameters,

#                           results, and accounting are

#                           reported to the terminal.

#                           Errors are reported in Pvl

#                           also to the terminal.

#       -  in interactive mode - same as command-line

#                           mode, but output is directed

#                           to the gui.  In the case of

#                           an error, nothing is reported

#                           to the gui except a pop-up

#                           window displaying the error.

#    Off - in command-line mode - only the results are

#                           reported to the terminal, or

#                           in the case of an error,

#                           the error is reported in Pvl

#                           to the terminal.

#        - in interactive mode - same as command-line mode,

#                           but the error is reported in

#                           a pop-up window in the gui.

# FileOutput = On | Off

# FileName = print.prt | /mydirectory/myfile.prt

# FileAccess = Append | Overwrite

########################################################

Group = SessionLog

  TerminalOutput = Off

  FileOutput     = On

  FileName       = print.prt

  FileAccess     = Append

EndGroup

########################################################

# Customize how cubes are created

#

# Overwrite = Error | Allow

# Format = Attached | Detached

# History = On | Off

# MaximumSize = max # of gigabytes

########################################################

Group = CubeCustomization

  Overwrite  = Allow

  Format     = Attached

  History    = On

  MaximumSize = 12

EndGroup

########################################################

# Customize how other files are created

#

# Overwrite = Error | Allow

#

# If Error, then overwrites of any non-cube

# file will be disallowed and an error will be thrown

########################################################

Group = FileCustomization

  Overwrite  = Allow

EndGroup

########################################################

# Customize how Isis uses your computer's resources.

#

# CubeWriteThread = Always | Optimized | Never

#   Always - Override Isis program defaults and always

#     use a separate thread for writing out cubes. This

#     will probably improve performance for some

#     programs, will probably negatively impact programs

#     that read/write the same file. This option should

#     be used with caution.

#   Optimized - Let the Isis program decide based on

#     it's own internal knowledge.

#   Never - Revert to the original method of writing

#     cubes always.

#

# GlobalThreads = Optimized | N

#   Optimized - The number of global (active processing)

#     threads used will match the current system's number

#     of CPU cores.

#   N -

#     Global (processing threads) encapsulate most of Isis'

#     CPU-intensive operations. This should be a

#     positive whole number greater than 0. This number

#     does not cull the number of other thread-types in

#     Isis, for example the cube write thread, but it

#     should fairly accurately reflect overall potential

#     CPU usage in Isis.

########################################################

Group = Performance

  CubeWriteThread = Optimized

  GlobalThreads = Optimized

EndGroup

########################################################

#

# Indicate where ISIS should search for Community

# Sensor Model (CSM) plugins. The value of this keyword

# should be a list of paths, that contain CSM plugin

# libraries.

#

########################################################

Group = Plugins

  CSMDirectory = ("$ISISROOT/lib/isis/csm3.0.3/", -

                  "$ISISROOT/csmlibs/3.0.3/", -

                  "$HOME/.Isis/csm3.0.3/")

EndGroup

########################################################

# Customize the location of mission specific data

# files (calibration and spice kernels).  Usually this

# should be left to the Isis administrator

########################################################

Group = DataDirectory

# Backwards compatability for versions prior to 4.1.0

  ISIS3DATA    = $ISISDATA

  Apollo15     = $ISISDATA/apollo15

  Apollo16     = $ISISDATA/apollo16

  Apollo17     = $ISISDATA/apollo17

  Base         = $ISISDATA/base

  Cassini      = $ISISDATA/cassini

  Chan1        = $ISISDATA/chan1

  Chandrayaan1 = $ISISDATA/chandrayaan1

  Clementine1  = $ISISDATA/clementine1

  Clipper      = $ISISDATA/../datalocal/clipper

  Control      = $ISISDATA/control

  Dawn         = $ISISDATA/dawn

  Galileo      = $ISISDATA/galileo

  Hayabusa     = $ISISDATA/hayabusa

  Hayabusa2    = $ISISDATA/hayabusa2

  Juno         = $ISISDATA/juno

  Kaguya       = $ISISDATA/kaguya

  Lo           = $ISISDATA/lo

  Lro          = $ISISDATA/lro

  Mariner10    = $ISISDATA/mariner10

  Mer          = $ISISDATA/mer

  Mex          = $ISISDATA/mex

  Messenger    = $ISISDATA/messenger

  Mgs          = $ISISDATA/mgs

  Mro          = $ISISDATA/mro

  Near         = $ISISDATA/near

  NewHorizons  = $ISISDATA/newhorizons

  Odyssey      = $ISISDATA/odyssey

  OsirisRex    = $ISISDATA/osirisrex

  Rolo         = $ISISDATA/rolo

  Rosetta      = $ISISDATA/rosetta

  Smart1       = $ISISDATA/smart1

  Tgo          = $ISISDATA/tgo

  Viking1      = $ISISDATA/viking1

  Viking2      = $ISISDATA/viking2

  Voyager1     = $ISISDATA/voyager1

  Voyager2     = $ISISDATA/voyager2

  Temporary    = .

EndGroup

End

# models.

#

# Leave the ShapeModel Group commented-out to continue

# using the ISIS3 default. 

# using the ISIS default.

#

# RayTraceEngine = Bullet | Embree

# OnError = Continue | Fail

  GlobalThreads = 2

EndGroup

########################################################

#

# Indicate where ISIS should search for Community

# Sensor Model (CSM) plugins. The value of this keyword

# should be a list of paths, that contain CSM plugin

# libraries.

#

########################################################

Group = Plugins

  CSMDirectory = ("$CONDA_PREFIX/lib/isis/csm3.0.3/", -

                  "$CONDA_PREFIX/csmlibs/3.0.3/", -

                  "$HOME/.Isis/csm3.0.3/")

EndGroup

########################################################

# Customize the location of mission specific data

# files (calibration and spice kernels).  Usually this

  Near         = $ISISDATA/near

  NewHorizons  = $ISISDATA/newhorizons

  Odyssey      = $ISISDATA/odyssey

  OsirisRex    = $ISISDATA/../datalocal/osirisrex

  OsirisRex    = $ISISDATA/osirisrex

  Rolo         = $ISISDATA/rolo

  Rosetta      = $ISISDATA/rosetta

  Smart1       = $ISISDATA/smart1