Commit 1b769459 authored by jay's avatar jay
Browse files

Removes all test warnings

parent 98042f8e
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+1 −2
Original line number Diff line number Diff line
@@ -284,8 +284,7 @@ class Node(dict, MutableMapping):
            keypoints = self.keypoints.loc[index][['x', 'y']]

        if homogeneous:
            keypoints['homogeneous'] = 1

            keypoints = keypoints.assign(homogeneous = 1)
        return keypoints

    def get_raw_keypoint_coordinates(self, index=slice(None)):
+3 −2
Original line number Diff line number Diff line
import unittest
from unittest.mock import Mock, MagicMock
import pytest

import ogr
import numpy as np
@@ -195,8 +196,6 @@ class TestEdge(unittest.TestCase):

        # Assert masked dst keypt coords are equal
        d_expected = pd.DataFrame({'x': (33, 32, 31), 'y': (28, 27, 26)})
        print(d_expected['x'])
        print(d_overlap['x'].values)
        self.assertTrue(np.array_equal(d_expected['x'], d_overlap['x'].values))
        self.assertTrue(np.array_equal(d_expected['y'], d_overlap['y'].values))

@@ -257,6 +256,7 @@ class TestEdge(unittest.TestCase):

        self.assertEqual(expected, e.__repr__())

    @pytest.mark.filterwarnings('ignore::UserWarning')
    def test_ratio_check(self):
        """
        A pretty basic test that simply tests pass through from the edge to the
@@ -319,6 +319,7 @@ class TestEdge(unittest.TestCase):

        # Should fail if no src & dst mbrs on edge; Warns user & mask isn't
        # populated
        with pytest.warns(UserWarning):
            e.overlap_check()
        self.assertTrue("overlap" not in e.masks)

+30 −26
Original line number Diff line number Diff line
@@ -39,6 +39,14 @@ def geo_graph():
                 c:[a,b]}
    return network.CandidateGraph.from_adjacency(adjacency, basepath=basepath)

@pytest.fixture()
def reduced_geo():
    basepath = get_path('Apollo15')
    a = 'AS15-M-0297_crop.cub'
    b = 'AS15-M-0298_crop.cub'
    adjacency = {a:[b], b:[a]}
    return network.CandidateGraph.from_adjacency(adjacency, basepath=basepath)

@pytest.fixture()
def disconnected_graph():
    return network.CandidateGraph.from_adjacency(get_path('adjacency.json'))
@@ -134,33 +142,29 @@ def test_from_adjacency():
        assert isinstance(e, edge.Edge)
        assert isinstance(g.nodes[s]['data'], node.Node)

def test_add_node():
    basepath = get_path('Apollo15')
    a = 'AS15-M-0297_crop.cub'
    b = 'AS15-M-0298_crop.cub'
    c = 'AS15-M-0299_crop.cub'
    adjacency = {a:[b],
                 b:[a]}
    g = network.CandidateGraph.from_adjacency(adjacency, basepath=basepath)

def test_add_node(reduced_geo):
    # Test without "image_name" arg (networkx parent method)
    g.add_node(2, data=node.Node(image_name=c,
    c = 'AS15-M-0299_crop.cub'
    basepath = get_path('Apollo15')
    reduced_geo.add_node(2, data=node.Node(image_name=c,
                                    image_path=os.path.join(basepath, c),
                                    node_id=2))
    assert len(g.nodes) == 3
    assert g.node[2]["data"]["image_name"] == c
    assert len(reduced_geo.nodes) == 3
    assert reduced_geo.node[2]["data"]["image_name"] == c

def test_add_node_by_name(reduced_geo):
    # Test with "image_name" (cg method)
    g = network.CandidateGraph.from_adjacency(adjacency, basepath=basepath)
    g.add_node(image_name=c, basepath=basepath)
    assert len(g.nodes) == 3
    assert g.node[2]["data"]["image_name"] == c
    assert g.node[0].keys() == g.node[1].keys() == g.node[2].keys()
    c = 'AS15-M-0299_crop.cub'
    basepath = get_path('Apollo15')
    reduced_geo.add_node(image_name=c, basepath=basepath)
    assert len(reduced_geo.nodes) == 3
    assert reduced_geo.node[2]["data"]["image_name"] == c
    assert reduced_geo.node[0].keys() == reduced_geo.node[1].keys() == reduced_geo.node[2].keys()

def test_add_node_nonexistent(geo_graph):
    # Test when "image_name" not found
    node_len = len(g.nodes)
    g.add_node(image_name="nonexistent.jpg")
    assert len(g.nodes) == node_len
    with pytest.warns(UserWarning):
        geo_graph.add_node(image_name="nonexistent.jpg")

def test_add_edge():
    basepath = get_path('Apollo15')
@@ -182,11 +186,11 @@ def test_add_edge():
    assert g.edges[1, 2]["data"].destination == g.node[2]["data"]
    assert g.edges[0, 1].keys() == g.edges[0, 2].keys() == g.edges[1, 2].keys()

    # Test when adj img not found
    g =  network.CandidateGraph.from_adjacency(adjacency, basepath=basepath)
    edge_len = len(g.edges)
    g.add_node(image_name=c, basepath=basepath, adjacency=["nonexistent.jpg"])
    assert len(g.edges) == edge_len
def test_add_edge_missing_img(reduced_geo):
    c = 'AS15-M-0299_crop.cub'
    basepath = get_path('Apollo15')
    with pytest.warns(UserWarning):
        reduced_geo.add_node(image_name=c, basepath=basepath, adjacency=["nonexistent.jpg"])

def test_equal(candidategraph):
    cg = copy.deepcopy(candidategraph)
@@ -285,7 +289,7 @@ def test_minimum_spanning_tree():
    assert sorted(mst_graph.nodes()) == sorted(graph.nodes())
    assert len(mst_graph.edges()) == len(graph.edges())-5


@pytest.mark.filterwarnings('ignore::UserWarning')
def test_fromlist():
    mock_list = ['AS15-M-0295_SML.png', 'AS15-M-0296_SML.png', 'AS15-M-0297_SML.png',
                 'AS15-M-0298_SML.png', 'AS15-M-0299_SML.png', 'AS15-M-0300_SML.png']
+1 −1
Original line number Diff line number Diff line
@@ -163,7 +163,7 @@ class TestNode(object):
        kpc = node.get_keypoint_coordinates(index=[2,4])
        assert len(kpc) == 2
        kpc = node.get_keypoint_coordinates(homogeneous=True)
        assert (kpc.homogeneous == 1).all()
        assert (kpc['homogeneous'] == 1).all()

    def test_get_raw_keypoint_coordinates(self, node):
        image = node.get_array()
+2 −2
Original line number Diff line number Diff line
@@ -63,7 +63,7 @@ def test_cifi_radii_too_large(template, search):
        ciratefi.cifi(template, search, 1.0, radii=[100], use_percentile=False)

def test_cifi_bounds_error(template, search):
    with pytest.raises(ValueError):
    with pytest.raises(ValueError), pytest.warns(UserWarning):
        ciratefi.cifi(template, search, -1.1, use_percentile=False)

def test_cifi_radii_none_error(template, search):
@@ -99,7 +99,7 @@ def test_rafi_warning(template, search):
def test_rafi_bounds_error(template, search):
    rafi_pixels = [(10, 10)]
    rafi_scales = np.ones(search.shape, dtype=float)
    with pytest.raises(ValueError):
    with pytest.raises(ValueError) as f, pytest.warns(UserWarning) as g:
        ciratefi.rafi(template, search, rafi_pixels, rafi_scales, -1.1, use_percentile=False)

def test_rafi_radii_list_none_error(template, search):
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